Transcript Information: R_Transcript_28372.p1


Annotated TAIR IDAT3G08850.1
Annotated Gene NameHEAT repeat ;WD domain, G-beta repeat protein protein
Annotated Gene Symbol(s)RAPTOR1B, ATRAPTOR1B, RAPTOR1
Annotation TypeOrtholog
Chromosome Positionchr3:2686978-2694911 | Reverse length=1344
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.853677646485
Replicate 28.1702995098203
Replicate 311.536364224149
Condition 2: 8 Hour
Replicate 19.120097523829
Replicate 29.6897154645137
Replicate 314.613361883514
Condition 3: 24 Hour
Replicate 115.954012414035
Replicate 211.443163308445
Replicate 316.130286714909


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_28372.p1 GENE.R_Transcript_28372~~R_Transcript_28372.p1 ORF type:complete len:1380 (+),score=265.94,Raptor_N|PF14538.2|1.1e-65,HEAT|PF02985.18|4.7e+02,HEAT|PF02985.18|3.1e+02,HEAT|PF02985.18|0.024,HEAT|PF02985.18|15,HEAT|PF02985.18|1.6e+04,HEAT_2|PF13646.2|7.4e+03,HEAT_2|PF13646.2|3.3e+03,HEAT_2|PF13646.2|1.1e-05,HEAT_2|PF13646.2|4.5e+03,WD40|PF00400.28|5.2e+03,WD40|PF00400.28|0.46,WD40|PF00400.28|5.9e+02,WD40|PF00400.28|47,WD40|PF00400.28|41 R_Transcript_28372:508-4647(+)
ATGGCATTGGGGGATTTAATGGCGACAACTAGGTTATCGCATTCGTCGTCGCTATCATCATCGTCATCGTCAGCAGTTGTGGTGTCGAATCATAATCATTTGGAGGATGACGTGGAATTGTATTTGAATCGCCAACAAAGAGACCTCTCTGAAACAACAGTTAGTACTAGTGGTGGTGGAGGAGGAGCTGCTGTAACGGCGATAACTTCGGCTTTGGCGGCGGTTGCGGTAGCAGGACCCTCGACAACGACGAGTAGTATGGTTTATTTGCCTCAGACGATAGTGTTTTGTGAGCTTAGACATGAAGGGTTTGAGGATTCTGTCCCCACTGGCCCCGCTGAGAGTGGCTTGGTCTCCAAATGGCGCCCCCGTGACCGAATGAAGACTGGAATGGTAGCTCTTGTTTTATGTTTAAATATCAGTGTCGACCCACCTGATGTTATTAAGATATCGCCTTGTGCTAGGATGGAGTGCTGGATAGATCCATTCTCACTACCAGCGAATAAGGCAATGGATGCTATTGGAGCAGCCCTCAATGCGCAATACGAAAGATGGCAGCCAAAGGCTCGATACAAGCCCCTTGTTGACCCAACTACAGAAGAAATAAAGAAAACTTGTCTTTCATGTCGAAAATATGCAAAGACAGAGCGAGTTTTGTTTCACTACAATGGCCATGGTGTGCCAAAACCGACAGCAAGTGGTGAAATTTGGATATTCAATAAGAGCTATACGCAGTATATACCCTTGCCGGTGACTGAGCTGGATTCGTGGTTGAAGTCGCCTTCTATATATGTCTTTGATTGTTCTGCTGCTGGACATGTTGTCAATGCTTTTATAGAGCTTATTGACGCCTCTGCATCCTCTGGCACCACAAAAGATTGCATTCTGCTTGCAGCTTGTGAAGCACATGAGACTCTTCCTCAGAGTGCTGAGTTCCCTGCTGATATTTTTACTTCCTGCCTCACAACACCTATCCAGATGGCCTTAAGATGGTTCTTCAAACGTTCATTGCTCCGAGAAACACTTGATTATTCACTCATCGATCAAATACCTGGTCGTCCAAATGATCGTAAGACACTTCTCGGTGAACTTAATTGGATTTTTACTGCGGTGACAGACACAATTGCTTGGAATGTTCTCCCGCATGATCTTTTTCAGAGGTTATTCAGACAAGATTTGTTAGTTGCAAGTCTGTTCCGAAATTTTTTACTGGCTGAGAGAATTATGCGTTCAGCCAACTGTTCCCCAATTTCATATCCAATGTTGCCACCAACCCATCAACATCATATGTGGGATGCATGGGACATGGCTGCTGAAATTTGCCTTTCTCAGCTTCCATCACTTGTTGAGGACCCGAGTGCTGAGTTTCAGCCAAGCCCCTTCTTTACTGAGCAGTTAACAGCTTTTGAAGTATGGCTTGACCATGGATCTGAACATAAGAAGCCACCTGAGCAGTTACCTATTGTTCTTCAGGTCTTACTTAGTCAATGCCACCGTTTCCGGGCGCTGGTGCTTCTTGGAAGATTTCTTGATATGGGGCCTTGGGCTGTTGATCTGGCCTTGTCAGTTGGGATATTTCCATATGTTCTGAAGTTGTTACAAACTACAACACCTGAATTGCGACAAATTCTTGTCTTCATTTGGACAAAAATTCTTGCGCTGGACAAGTCTTGTCAGGTGGATCTGGTGAAGGATGGAGGGCATACATATTTTATTAGATTTCTTGACAGCTTGGAAGCCTATCCTGAGCAGCGTGCGATGGCTGCATTTGTTTTAGCTGTCATTGTGGATGGTAATAAAAGGGGGCAGGAGGCCTGTATCGAAGCTGGGTTGCTGGATGTTTGCCTCAAGCACCTTCAGACTCCAACTCCAAATGATGCTCAGTCTGAACCTTTATTTCTCCAGTGGCTTTGTCTCTGTCTAGGAAAGCTGTGGGAAGATTTTATGGAGGCTCAAATAGTAGGTTTCCAGGCAGGTGCTGCTGTCATATCCGCATCTCTACTGTCCGAGCCCCAACCTGAGGTTAGAGCCTCTGCTGTATTTGCACTGGGAACTTTGCTTGACGTTGGTTTTGAACCTCCGGGAGATGGAGGGGATGAAGACTGTGATGATGATGAAAAGTTTAGAGCGGAAATTAATATTGTTAAAAACCTGCTTGGTGTTGTTTCTGACGGAAGCCCTCTCGTTAGGGCTGAGGTCGCAGTAGCGTTAGCGCGATTTGTTTTTGGCCATAACAAGCATCTCAAGTCTGTTGCTGCTACTTACTGGAGATCTCAGTCAAGCTCGGGGCTTGGTACCCTGCCATTGGCACATGTCAATAGTACTGGCAGCGGTTATAATACTCCAAACCACTACATGCCCCAGGGAAGTATCATCACTTCCCAAATTGGCCCTGTTTTAAGAATTGGTGACAGTACATCTGTTGTGCGAGAGGGAAGAGTTTCAACCAGTAGTCCTCTAGCTAATGCAGGAATAATGCATGGGTCCCCAATGTCAGATGATTCATCACACCACTCTGATGCATCAAATGATGCTGTAAGCAATGGAATACTGAACCATGCAAGGCCTCAACCTGTTGATGGTGGTCTCTATTTGGAGTGTATATTTGCCATGTGCACATTGGCGAGGGATCCATCACCTCGTATTGCAAGACTTGGGCGCAGAGTATTGTCTATTATTGGGATTGAGCAGGTTGTTGCAAGACCTTTAAGGCATTCTACTAGCAGTGTTCGCCCAAGTGAACAGGTCACATCAGCAGGCCCACGACTTTCTGGGCTAGCTCGCTCATCATCATGGTTCGATATGAATTCAGGTCACCTCCCTTTGACATTTAGAACACCACCTGTGAGCCCTCCCAGAGCAAGTTACTTGGCAGGAATACGGAGAGTTTCTTCCTTGGAGTTTCGGCCTCACTTGCTTAGTTCGCCAGACTCAGGCTTAGCAGATCCGCTTCTAGGATATGGTGGACCTTCTGGTCACACAGAGCGCAGTCTCCTTCCACGATCAACTATATATAATTGGAGTTGTGGGCACTTCTCAAAGCCTCTTCTTACTGCATCAGATGACAGTGAGGAATTAATAGCTAGAAGGGAAGCAAAGGAAAGATCTGCTTTAGATCTGATAGCGAAATGTCAGCACTATTCTGTTAGCAAGCTTAATAATCAAATTGCAAGCTGGGACACCAAATTTGAGACTGGTACGAAAACCACATTACTACAACCTTTCTCTCCTGTTGTGGTTGCAGCTGACGAGAGAGAGAGGATTAGGGTGTGGAATTATGAGGAACCTACTCTTCTTAATAGCTTTGACAATCATGAATTTCCTGATAAAGGAATCTCGAAGCTCTGCCTTGTAAATGAACTTGATGAGAGCTTGCTTCTTGTAGCTTCCGGTGATGGAAGTGTTCGGATTTGGAAAGATTACCTCCAAAGGGGACAGCAGAAGCTTGTAACTGCCTTCTCTTCCATACCAGTGAATGGGCCTGTTGCCAGAAATGTGAATGCTGTGGTGGATTGGCAGCAATCATCTGGACACCTTTTTACATCAGGAGAAATTTCATCAATCAAGGTATGGGATCTTGACAAAGAACAACTTGTGCACTCCATTCCATTATCTTCAGAATGCAGCACATCAGCACTGGCTGCTTCCCAGGTCCATGGAGGTCAATTTGCTGCCGGTTTTCTTGACGGTTACGTAAGACTGTTTGACACCAGAACACCTGAAATGCTTGTCTGCTCTGTGCGGCCCCATACACAGAGAGTTGTGGGGATTGGCTTTCAACCAGGACTTGATCTGGCTAAGATTGTCAGTGCTTCTCAAGCTGGTGATATTCAATTCCTAGATATTAGAAATTACAGTGATGCATACCTGACAATTGATGCACATAGAGGTTCACTGACAGCATTAGCTGTTCATCGGCATGCCCCAATAATTGCCAGTGGTTCAGCAAAACAGCTTATTAAAGTATTCAGTCTAGAAGGTGAGCAACTGGGCACCATCCGCTACCATCCTACTTTCATGGCCCAGAAAATTGGACCTGTGAGCTGCCTGACATTCCATCCCTATCAAGTACTCCTAGCTGCTGGTGCTGCAGACCCCTTTGTCACGCTGTATGCTGACGACAATAATCCTGCCAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_28372.p1 GENE.R_Transcript_28372~~R_Transcript_28372.p1 ORF type:complete len:1380 (+),score=265.94,Raptor_N|PF14538.2|1.1e-65,HEAT|PF02985.18|4.7e+02,HEAT|PF02985.18|3.1e+02,HEAT|PF02985.18|0.024,HEAT|PF02985.18|15,HEAT|PF02985.18|1.6e+04,HEAT_2|PF13646.2|7.4e+03,HEAT_2|PF13646.2|3.3e+03,HEAT_2|PF13646.2|1.1e-05,HEAT_2|PF13646.2|4.5e+03,WD40|PF00400.28|5.2e+03,WD40|PF00400.28|0.46,WD40|PF00400.28|5.9e+02,WD40|PF00400.28|47,WD40|PF00400.28|41 R_Transcript_28372:508-4647(+)
MALGDLMATTRLSHSSSLSSSSSSAVVVSNHNHLEDDVELYLNRQQRDLSETTVSTSGGGGGAAVTAITSALAAVAVAGPSTTTSSMVYLPQTIVFCELRHEGFEDSVPTGPAESGLVSKWRPRDRMKTGMVALVLCLNISVDPPDVIKISPCARMECWIDPFSLPANKAMDAIGAALNAQYERWQPKARYKPLVDPTTEEIKKTCLSCRKYAKTERVLFHYNGHGVPKPTASGEIWIFNKSYTQYIPLPVTELDSWLKSPSIYVFDCSAAGHVVNAFIELIDASASSGTTKDCILLAACEAHETLPQSAEFPADIFTSCLTTPIQMALRWFFKRSLLRETLDYSLIDQIPGRPNDRKTLLGELNWIFTAVTDTIAWNVLPHDLFQRLFRQDLLVASLFRNFLLAERIMRSANCSPISYPMLPPTHQHHMWDAWDMAAEICLSQLPSLVEDPSAEFQPSPFFTEQLTAFEVWLDHGSEHKKPPEQLPIVLQVLLSQCHRFRALVLLGRFLDMGPWAVDLALSVGIFPYVLKLLQTTTPELRQILVFIWTKILALDKSCQVDLVKDGGHTYFIRFLDSLEAYPEQRAMAAFVLAVIVDGNKRGQEACIEAGLLDVCLKHLQTPTPNDAQSEPLFLQWLCLCLGKLWEDFMEAQIVGFQAGAAVISASLLSEPQPEVRASAVFALGTLLDVGFEPPGDGGDEDCDDDEKFRAEINIVKNLLGVVSDGSPLVRAEVAVALARFVFGHNKHLKSVAATYWRSQSSSGLGTLPLAHVNSTGSGYNTPNHYMPQGSIITSQIGPVLRIGDSTSVVREGRVSTSSPLANAGIMHGSPMSDDSSHHSDASNDAVSNGILNHARPQPVDGGLYLECIFAMCTLARDPSPRIARLGRRVLSIIGIEQVVARPLRHSTSSVRPSEQVTSAGPRLSGLARSSSWFDMNSGHLPLTFRTPPVSPPRASYLAGIRRVSSLEFRPHLLSSPDSGLADPLLGYGGPSGHTERSLLPRSTIYNWSCGHFSKPLLTASDDSEELIARREAKERSALDLIAKCQHYSVSKLNNQIASWDTKFETGTKTTLLQPFSPVVVAADERERIRVWNYEEPTLLNSFDNHEFPDKGISKLCLVNELDESLLLVASGDGSVRIWKDYLQRGQQKLVTAFSSIPVNGPVARNVNAVVDWQQSSGHLFTSGEISSIKVWDLDKEQLVHSIPLSSECSTSALAASQVHGGQFAAGFLDGYVRLFDTRTPEMLVCSVRPHTQRVVGIGFQPGLDLAKIVSASQAGDIQFLDIRNYSDAYLTIDAHRGSLTALAVHRHAPIIASGSAKQLIKVFSLEGEQLGTIRYHPTFMAQKIGPVSCLTFHPYQVLLAAGAADPFVTLYADDNNPAR*

Click here to download the sequence:
Link to NCBI Protein BLAST