Transcript Information: R_Transcript_28382.p1


Annotated TAIR IDAT5G22010.1
Annotated Gene Namereplication factor C1
Annotated Gene Symbol(s)AtRFC1, RFC1
Annotation TypeOrtholog
Chromosome Positionchr5:7280632-7287037 | Reverse length=956
E-Value2.7E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4707421776464
Replicate 20.63442058811836
Replicate 31.549088729524
Condition 2: 8 Hour
Replicate 11.0569438106725
Replicate 21.5443486739236
Replicate 31.7759849240091
Condition 3: 24 Hour
Replicate 12.5765596600877
Replicate 21.840582756336
Replicate 31.7006274145215


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_28382.p1 GENE.R_Transcript_28382~~R_Transcript_28382.p1 ORF type:5prime_partial len:695 (+),score=152.85,BRCT|PF00533.22|4.5e-16,BRCT|PF00533.22|9.8e+03,PTCB-BRCT|PF12738.3|1e-05 R_Transcript_28382:1-2085(+)
ACACCTGCTGCTGGTGGACGAGGAAGAGGAGCTGGTAGACGAGGTGGGTTCATGAACTTTGGTGAGAGGAAAGATCCACCCCATAAAGGCGAAAAGGAAGTTCCTGAAGGCGCTCCTGATTGTTTAAATGGCTTGACTTTCGTGATTTCTGGAACACTAGACAGTTTGGAAAGGGAAGAAGCTGAAGATTTGATCAAACGGCATGGTGGTCGTGTTACTGGATCAGTCAGCAAGAAAACGAATTATCTTTTATGTAATGAGGATATTGGGGGACTGAAATCTGCAAAAGCCAAAGAACTTGGAACACCTTTTCTGACAGAGTATGGGCTGTTTGATATGATCCGTGCTTCTAGAAGATCAAAAACTCGTGCTCAAAGCAAGTCAAAGAAACCTTCTTATAGCATCCCTACATCTACTGTGAGGAAGATTCAGCAGAATGTGCGACCAGATGGTACCTCAGAAAAGGAGCTTATGGAGAATCCTTCTTTGGATTCACATCCCTTATCCACTATTCCTCAAAATCATGCCCCATTGAATTTGAGGGGCAAGAGGAAAAAGAGACGGGCTTGGAAGGATTCGAAGTGGCCAAATATTGCTGCTCAAAAAGAGGCCAAAAGAGCTCTGAGATGTACCACTTCAGATGCAGAGGTAAATGAGGAAGAGGAGGTACCCCTCATAAGATTCGGAAGACGGGGCTCCTCCAACACCCAACAAACACAACATGTAGGAAGCATAGCTAGCCCTGGCACTTCTACAATTTCCCCTACAACAGAGACTCCTATCGACTCAGATGATGTACTCATCTCCTCCCTTCTCAAGACATGTCCCTCAGCCTCAGCTGGTGGATCAATACAAACCCAACCTAAAAAGGTTGTAGATGTTCACCCTGCTCCTGAGGTAGCAGATAGTCTGAAGCCGCTTGAGAAGGACCCCAAGGAAAGCCCTGAAGTCATCTCAATAGAAGAAGAGGGAAGACACTGCTCGTCAATGATAACGGAATCCAGGGCCATAGGTGTCAAAGAAACACTCGTTACTTCTCCAAAAGAAAGAGCTATAGATGTTGATGCGATGCACTTTTTATCTGACAGTCAAGATTCTGAAGGTTCCACAGAGGTTCCAACTGAAACAGGGTGTTTTGAGGCACCTGACAATCAAGTCTCTCAGGACCCTTCAAAGATCTTTATTACCACAGAACTTTCATCAGATGCACCTTTCATCGACAGCACCTCTGATGAACATATTGTTCAATCCATTCCCCTTATTTATGAAATTCACTCTTCAACACCTGCAAAGGAACTGGCTGTTGTCCTCTACCAGCCTAGTTCTCAGACAAAAGACCATTTAATCAAGGAAGAGTCTTTAGGAGGCACGTCAAATAGTCTATCTATGTCCTCAAAGACTACTTCTGATCTGGAAGTGTCAAAGAATTTGATGCCTGAGGTACCCCCCAAGCCTGCTATTTTGGTTGAAGACCTAGATGATCTTTTAGAAGGCTTGAGAGGTGATTCATCTTCCAAGTTGCAGTCTCGATCATCCAAGGATCAAATCTTATCTGTTGCGGCAAGACTGAAATATGATCCTTCGAACCTAGAATTGATGAAAGAATGTTCTGGGCTACTTCGGGAGATTTACCCTTTGATGGCTGGGCATTGCAGACCTGCTCTTAAATCCCTTGAGCGTGCCATAATCGAGGCTCAACAACAATTCATAAGCTGGAGCCTAAAAGAGTCCGTGCTCAAGATTGACTCTTCAGAAGTGGTTTCGATCACATCCCATCTTGCCCACGCCAAAGAAAAGGTGTTGTGTTGCTCTTCTTTTCAGGAGAAACTGCAAACGCAAATTGCTGACATTGATAAAGAGATAGCCAAGTTGGTAGACTTGCGGTCCAATGCTGAAGAACAGCTCAAATATGTAAATCATGAGCTAAATAGTCTTTCCTCAACCTTGAGCCCCATCGTTGAGGTGGCAAGGGTTCGAATTGATCGTTTGAAGGCCTTCCGAGAAGCTGAGGAATCAAAAATTAGGGCCAAACATTCCATCGAGGCGTTGTTAGATGGTTTATCTAGTGTATTAGAAACGGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_28382.p1 GENE.R_Transcript_28382~~R_Transcript_28382.p1 ORF type:5prime_partial len:695 (+),score=152.85,BRCT|PF00533.22|4.5e-16,BRCT|PF00533.22|9.8e+03,PTCB-BRCT|PF12738.3|1e-05 R_Transcript_28382:1-2085(+)
TPAAGGRGRGAGRRGGFMNFGERKDPPHKGEKEVPEGAPDCLNGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCNEDIGGLKSAKAKELGTPFLTEYGLFDMIRASRRSKTRAQSKSKKPSYSIPTSTVRKIQQNVRPDGTSEKELMENPSLDSHPLSTIPQNHAPLNLRGKRKKRRAWKDSKWPNIAAQKEAKRALRCTTSDAEVNEEEEVPLIRFGRRGSSNTQQTQHVGSIASPGTSTISPTTETPIDSDDVLISSLLKTCPSASAGGSIQTQPKKVVDVHPAPEVADSLKPLEKDPKESPEVISIEEEGRHCSSMITESRAIGVKETLVTSPKERAIDVDAMHFLSDSQDSEGSTEVPTETGCFEAPDNQVSQDPSKIFITTELSSDAPFIDSTSDEHIVQSIPLIYEIHSSTPAKELAVVLYQPSSQTKDHLIKEESLGGTSNSLSMSSKTTSDLEVSKNLMPEVPPKPAILVEDLDDLLEGLRGDSSSKLQSRSSKDQILSVAARLKYDPSNLELMKECSGLLREIYPLMAGHCRPALKSLERAIIEAQQQFISWSLKESVLKIDSSEVVSITSHLAHAKEKVLCCSSFQEKLQTQIADIDKEIAKLVDLRSNAEEQLKYVNHELNSLSSTLSPIVEVARVRIDRLKAFREAEESKIRAKHSIEALLDGLSSVLETV*

Click here to download the sequence:
Link to NCBI Protein BLAST