Transcript Information: R_Transcript_284331.p1


Annotated TAIR IDAT5G25930.1
Annotated Gene NameProtein kinase family protein with leucine-rich repeat domain
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:9050880-9053978 | Forward length=1005
E-Value1E-131
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.39947557645007
Replicate 20.45951499227588
Replicate 30.57845296959981
Condition 2: 8 Hour
Replicate 10.82443989721364
Replicate 21.3552049600719
Replicate 31.9862873574497
Condition 3: 24 Hour
Replicate 10.50244359252551
Replicate 20.48269085114058
Replicate 30.36847987688379


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_284331.p1 GENE.R_Transcript_284331~~R_Transcript_284331.p1 ORF type:5prime_partial len:594 (+),score=69.61,Pkinase|PF00069.21|3.1e-45,Pkinase_Tyr|PF07714.13|8.2e-41,LRR_8|PF13855.2|0.00011,LRR_8|PF13855.2|2.2e-06,LRR_8|PF13855.2|9.1e-05,LRR_8|PF13855.2|0.0042,LRR_4|PF12799.3|3.7e+02,LRR_4|PF12799.3|0.00099,LRR_4|PF12799.3|0.0049,LRR_4|PF12799.3|0.0045,LRR_4|PF12799.3|7.5e+03,LRR_1|PF00560.29|4.2e+02,LRR_1|PF00560.29|0.33,LRR_1|PF00560.29|2.8e+02,LRR_1|PF00560.29|4.9e+02,LRR_1|PF00560.29|0.6,LRR_1|PF00560.29|2.9,LRR_1|PF00560.29|74 R_Transcript_284331:2-1783(+)
AGATTTAGTGGTAACATTCCAAGCTCAATAGGGCAGCTTCGAGGTTTGCTTTACCTTAAACTTAGGTTCAACAGCTTTAGTGGTAACATTCCAAGCTCAATAGGGCAGCTCCGAGAGTTGACTTACCTTGACCTTAGCAACAACAGATTTAGTGGTAACATTCCAAGCTCAATAGGGCAGCTCCGAAGGTTGCTTTACCTTAAACTTAGGTTCAACAGCTTTAGTGGTAACATTCCAAGCTCAATAGGGCAGCTCCGAGGGTTGACTTTCCTTGACCTTAGCAACATCAGATTTAGTGGTAACATTCCAAGCTCAATAGGGCAGCTCCAAGGGCTGACTTACCTTGACCTTAGCTTCAACAGTTTTAGTGGTAACATTCCACGCTCAATAGGGCAGCTCCAATGGCTGACCACCTTGAACTTAGAATCAAATGATTTGATTGGCGAAATTCCAGTAAGTTTGGCTAAGATGTCTAGCCTTGAGGTTTTAAGGTTGGCCCAAAATAACTTGGTGGGTGAGATACCAAGAGAGATATTCTTGCTCAGGAATTTGAGTTCCTCGGACTTTCAGGGCAACCCCAACTTGTGTTCCGACATCAAAACTTTTGGTATTCCTAGATGCACATATGCATTCGGCCAGGTCTCGACTTTCTCTTTTAACAGATATCTTGCAGCAATAATTCTACTCCCTGTTGCAATTGCTATGATGATTTTGTACTTGTTATTCTCCAAAGTCATCATTCCCCGACAAAGAAAAAGGCGACAACACAATGTTGAGCAACCATCCTGGACAATGACTACGTTTCACAACCTGAGCTTTACCAAAACAGACATTCTGTGTGGTCTGATAGAAACCAATGTGATTGGGTCGGGTGGATCAGGAAAGATATACAGCGTTGATATTACTAATTCAGGTGGTAAGGTTGCTGTTAAAAGAATATGGAATGACACAGAACTCAACTCTGCTCTTGAAAAGCAGTTCAAAGCCGAGGTTGAGATACTCGGCAGAATAAGGCATGTTAACATGGTCAAGTTGCTATGTTGTGTCTCAAAAGTTGATTCAATGCTGCTGGTATATGAGTACATGGAAAACCAGAGCCTCGACAAGTGGCTTCGCCCCAAGAACAAAACGCATCATGAATCATCAGATGTGCGTTCTGCTGTTCTGGATTGGCCGACAAGGTTGCGGATTGCGATTGGAGCTGCAAAGGGACTAAGCTATATGCACCATGACTGCTCTCCACCCATCATTCATAGAGACGTGAAGACAAGCAATGTCTTGTTGGACTGTGAATTCAATGCCAAAATTGCAGACTTTGGACTAGCCAAGATGTTAGCCTATGAAGCAGGAGATCCTCGCACTGCTTCTGTTGTTGCAGGATCTTTCAGTTACATTGCCCCAGAGTATTGGCGGACACAACGACTGAATGAGAAGATTGACATATACAGCTTCGGAGTGGTGCTCCTAGAACTAGCGACAGGGAAGGAACCGTGCAAGGGGAATAACTATTTGAACCTGGCAGACTGGTCATGGAAGCACTACTGCGAGGGCCAACCTATTGCAGATGCCTTAGACAACAACATCAAAGAGCCCTGCTTCCTGGACGAAATGATTAAAGTGTTTACAATAGGACTCATGTGCACCAGTAAAGTCCCTTCATCGAGACCATCGATGAAGCAGGTTCAGCAAATGCTCACTGACTGCAGCCACTGTGAGGCTTCTACAGACAGCCTGAGCCAAGAAGATGGTGTCACTCCCTTCTTAAGCGACAACTCTACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_284331.p1 GENE.R_Transcript_284331~~R_Transcript_284331.p1 ORF type:5prime_partial len:594 (+),score=69.61,Pkinase|PF00069.21|3.1e-45,Pkinase_Tyr|PF07714.13|8.2e-41,LRR_8|PF13855.2|0.00011,LRR_8|PF13855.2|2.2e-06,LRR_8|PF13855.2|9.1e-05,LRR_8|PF13855.2|0.0042,LRR_4|PF12799.3|3.7e+02,LRR_4|PF12799.3|0.00099,LRR_4|PF12799.3|0.0049,LRR_4|PF12799.3|0.0045,LRR_4|PF12799.3|7.5e+03,LRR_1|PF00560.29|4.2e+02,LRR_1|PF00560.29|0.33,LRR_1|PF00560.29|2.8e+02,LRR_1|PF00560.29|4.9e+02,LRR_1|PF00560.29|0.6,LRR_1|PF00560.29|2.9,LRR_1|PF00560.29|74 R_Transcript_284331:2-1783(+)
RFSGNIPSSIGQLRGLLYLKLRFNSFSGNIPSSIGQLRELTYLDLSNNRFSGNIPSSIGQLRRLLYLKLRFNSFSGNIPSSIGQLRGLTFLDLSNIRFSGNIPSSIGQLQGLTYLDLSFNSFSGNIPRSIGQLQWLTTLNLESNDLIGEIPVSLAKMSSLEVLRLAQNNLVGEIPREIFLLRNLSSSDFQGNPNLCSDIKTFGIPRCTYAFGQVSTFSFNRYLAAIILLPVAIAMMILYLLFSKVIIPRQRKRRQHNVEQPSWTMTTFHNLSFTKTDILCGLIETNVIGSGGSGKIYSVDITNSGGKVAVKRIWNDTELNSALEKQFKAEVEILGRIRHVNMVKLLCCVSKVDSMLLVYEYMENQSLDKWLRPKNKTHHESSDVRSAVLDWPTRLRIAIGAAKGLSYMHHDCSPPIIHRDVKTSNVLLDCEFNAKIADFGLAKMLAYEAGDPRTASVVAGSFSYIAPEYWRTQRLNEKIDIYSFGVVLLELATGKEPCKGNNYLNLADWSWKHYCEGQPIADALDNNIKEPCFLDEMIKVFTIGLMCTSKVPSSRPSMKQVQQMLTDCSHCEASTDSLSQEDGVTPFLSDNST*

Click here to download the sequence:
Link to NCBI Protein BLAST