Transcript Information: R_Transcript_284580.p1


Annotated TAIR IDAT5G18440.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Nuclear fragile X mental retardation-interacting protein 1, conserved region (InterPro:IPR019496); Has 1333 Blast hits to 1211 proteins in 205 species: Archae - 0; Bacteria - 137; Metazoa - 339; Fungi - 162; Plants - 70; Viruses - 6; Other Eukaryotes - 619 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6113092-6115748 | Forward length=470
E-Value2E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.47205933503583
Replicate 21.086015538774
Replicate 32.3696625099468
Condition 2: 8 Hour
Replicate 13.3773606823786
Replicate 21.156597336613
Replicate 30.62591760759955
Condition 3: 24 Hour
Replicate 12.572857706553
Replicate 21.1407892529609
Replicate 33.0189937499169


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_284580.p1 GENE.R_Transcript_284580~~R_Transcript_284580.p1 ORF type:internal len:116 (+),score=22.36 R_Transcript_284580:1-345(+)
ATTCCATCACACTATTTAATGGATGCAGAAGACTTGCCCCATGGTAAGGACGGGAACAGAAAGCCATTCAACAGCGGGCGATTCCAGAACAAGACCAATAAGAGGGGAAAATTTGACAAAAACAACCGTTTTGATAAGAAAAGAGGACCCGAGGGCAATGGTTCATTGAAGAGAAATGAGCGGTTTACAAAAAGAAAAAGGGTGGAGGAGGGTGATGTATCATCAACGAATCCTCCGAGTATCAAGAAGCCAACACTTCTTCAAAAGCTTTTGAGCCCGGATATAAAAAGAGATGAGTATCGCCTGTTGCAGGCACTTCGCTTCATGGTGATGAATTCTTTCTTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_284580.p1 GENE.R_Transcript_284580~~R_Transcript_284580.p1 ORF type:internal len:116 (+),score=22.36 R_Transcript_284580:1-345(+)
IPSHYLMDAEDLPHGKDGNRKPFNSGRFQNKTNKRGKFDKNNRFDKKRGPEGNGSLKRNERFTKRKRVEEGDVSSTNPPSIKKPTLLQKLLSPDIKRDEYRLLQALRFMVMNSFF

Click here to download the sequence:
Link to NCBI Protein BLAST