Transcript Information: R_Transcript_284825.p1


Annotated TAIR IDAT1G22060.1
Annotated Gene NameLOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT1G22000.1); Has 84739 Blast hits to 38714 proteins in 2257 species: Archae - 1436; Bacteria - 11314; Metazoa - 40747; Fungi - 7706; Plants - 4675; Viruses - 308; Other Eukaryotes - 18553 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:7773373-7780586 | Reverse length=1999
E-Value6E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.634885598425
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.21292056475865
Replicate 20.58332735237875
Replicate 30.78920046175596
Condition 3: 24 Hour
Replicate 10.39926621265572
Replicate 20.19178485991806
Replicate 30.19032786684258


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_284825.p1 GENE.R_Transcript_284825~~R_Transcript_284825.p1 ORF type:3prime_partial len:115 (+),score=27.70 R_Transcript_284825:23-343(+)
ATGAATCCTCCTTTTCCTAGAATGAAAACCACTGATTCAGACTTGAGTTTGAAATGGCTAAAGGGTCTTTCAGTTTTGGAGGATAAAATCAGAGAAGTTCAGAACAAGGTGTGTCTTGGATTGCATGGAAAAGAGTCAATGTTTCTGCACTCAGATCTTGAAGCACTACTCACTGTTCTGCAAGACCTTAAACGAGGAACAGACCACTCAGTTTATCAGCTAAATGGAACACCTGATGGAAAAACAGCAAATAGTGAAATGTGTGGCCTTAAAACAGATGATGTAATGTCAGATACAGGTCTTGGGGTTGAGTTGTGTCAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_284825.p1 GENE.R_Transcript_284825~~R_Transcript_284825.p1 ORF type:3prime_partial len:115 (+),score=27.70 R_Transcript_284825:23-343(+)
MNPPFPRMKTTDSDLSLKWLKGLSVLEDKIREVQNKVCLGLHGKESMFLHSDLEALLTVLQDLKRGTDHSVYQLNGTPDGKTANSEMCGLKTDDVMSDTGLGVELCH

Click here to download the sequence:
Link to NCBI Protein BLAST