Transcript Information: R_Transcript_284990.p1


Annotated TAIR IDAT2G17695.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960); Has 259 Blast hits to 259 proteins in 120 species: Archae - 0; Bacteria - 197; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:7684214-7685009 | Reverse length=205
E-Value1E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.57040502983496
Replicate 20.56240090400798
Replicate 31.5339333211709
Condition 2: 8 Hour
Replicate 14.5910996776085
Replicate 20.29947609608731
Replicate 30.32413590393548
Condition 3: 24 Hour
Replicate 10.10249021083797
Replicate 20.19692195438015
Replicate 30.09771296735222


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_284990.p1 GENE.R_Transcript_284990~~R_Transcript_284990.p1 ORF type:5prime_partial len:224 (+),score=32.16,DUF1990|PF09348.6|5.1e-35 R_Transcript_284990:3-674(+)
TTTATTAAACTACTCCCACATTTGATATTATTGACTTGTTCATACAGAGAAATGCTTTCTCTATATTGGACTCGTCCATCTCCCAGTGATCAAAAAGCTTGCTTGGATAAGGCTGGGTCCTTAAATTTTGAATTTAAATATAAAGGAGAAACAGCTAGGTCATTATCTTCTCTGCAGGAAGATAAGCAGCTCTCAAGGGAGGGTTTCTTCCTCAATCATGCTCGAATTAAGCTTGGTTCTGGGATAGAGACATATGAGAAAGCAAAGAATGCTCTTCAAAATTGGAGGCATTATGATATGAGTTGGATTTTTGTTGAGCCTGCGACCCAGATTGAAAGTGGGCAGAAGTTTTGTGTTTGTGCGAGGCAGATGGTACCATGGGTTATGATACCCTCTCAAGTGGTGTATGTTAATGAGAAAAAGAATGTTGACAACGTAAAAGCTTCCTTCAGCTTTGGCATTAGTAGTCTTCAAGGTTCCCTACTGGCCGGTGAAGAACGCTTTTCAGTTGAATTGGATGACAACGGTCAAGTTTGGTATGAAGTCCTTTCCTTGTCAAAAGCTGAAGGAAATTTACTGTCTTTAATTCTGTATCCCTTCGTAAAGTATACACAAAAGTGTTTCGCAAAGGAGTCTGCTGACGCAATGTTTAAAAATGTATGTGTGGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_284990.p1 GENE.R_Transcript_284990~~R_Transcript_284990.p1 ORF type:5prime_partial len:224 (+),score=32.16,DUF1990|PF09348.6|5.1e-35 R_Transcript_284990:3-674(+)
FIKLLPHLILLTCSYREMLSLYWTRPSPSDQKACLDKAGSLNFEFKYKGETARSLSSLQEDKQLSREGFFLNHARIKLGSGIETYEKAKNALQNWRHYDMSWIFVEPATQIESGQKFCVCARQMVPWVMIPSQVVYVNEKKNVDNVKASFSFGISSLQGSLLAGEERFSVELDDNGQVWYEVLSLSKAEGNLLSLILYPFVKYTQKCFAKESADAMFKNVCVG*

Click here to download the sequence:
Link to NCBI Protein BLAST