Transcript Information: R_Transcript_285072.p1


Annotated TAIR IDAT3G23230.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:8289647-8290066 | Reverse length=139
E-Value1.5E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.088606606576305
Replicate 20.50961894214316
Replicate 30.7783842872479
Condition 2: 8 Hour
Replicate 10.59431711037003
Replicate 20.21709594020569
Replicate 30
Condition 3: 24 Hour
Replicate 10.55722833076952
Replicate 21.1777079990114
Replicate 30.42500397450286


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_285072.p1 GENE.R_Transcript_285072~~R_Transcript_285072.p1 ORF type:5prime_partial len:206 (+),score=30.94,AP2|PF00847.16|1.7e-15 R_Transcript_285072:3-620(+)
CAAATCCAACACTTACCACTTTCAAGCCCGCCATTACAATTTTGTACACCCCTTATATATGTTCCACATATAAGTTTCCTCTTTCACATCAACACAACCCTCTTCCCTCCACGAACTTGCTATATTCTTAAATCAAAAGAGCTTAAACAACCTTTTTATCTTATCTATCTGTCTATCTTTCTATCTCTGTCTATACAGATGGAACATGATAATAGAGGAAAATCGTTGCCAAGTGACCAATCAAATGCCTCCAAGTATAGAGGGGTTCGTAGGCGGCCATGGGGGAAGTTTGCGGCGGAGATAAGGGACCCAAAGAGAAATGGGGCCCGCCTATGGCTTGGGACCTATGACACGGCGGAGGAGGCGGCGAGGGCTTATGATAGGGCGGCATTTGCCTTGAGGGGCCACCTTGCAATCCTCAACTTCCCTAATGAACAACATTATCACTCTGCTGATAATACTACTAATTTGGATGTTTTAGGAAGAAATAGAGGGAGCTCTTCATCACCTAGAGTCCAAGAGGACCCTCAAAAGCAAGTTATTGAATTTGAATATGTTGATGATAATGTGTTAGAGGAGCTTCTTGATGCACAACAAGAAGGCAAAGACAAGCATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_285072.p1 GENE.R_Transcript_285072~~R_Transcript_285072.p1 ORF type:5prime_partial len:206 (+),score=30.94,AP2|PF00847.16|1.7e-15 R_Transcript_285072:3-620(+)
QIQHLPLSSPPLQFCTPLIYVPHISFLFHINTTLFPPRTCYILKSKELKQPFYLIYLSIFLSLSIQMEHDNRGKSLPSDQSNASKYRGVRRRPWGKFAAEIRDPKRNGARLWLGTYDTAEEAARAYDRAAFALRGHLAILNFPNEQHYHSADNTTNLDVLGRNRGSSSSPRVQEDPQKQVIEFEYVDDNVLEELLDAQQEGKDKH*

Click here to download the sequence:
Link to NCBI Protein BLAST