Transcript Information: R_Transcript_285190.p1


Annotated TAIR IDAT2G47560.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:19511934-19512617 | Reverse length=227
E-Value1.2E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.32740737138509
Replicate 20.188307627052
Replicate 30.41088318558121
Condition 2: 8 Hour
Replicate 10.10980208496523
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.10294980819598
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_285190.p1 GENE.R_Transcript_285190~~R_Transcript_285190.p1 ORF type:complete len:223 (+),score=1.34,zf-RING_2|PF13639.2|3.8e+03,zf-RING_2|PF13639.2|2.1e-16,zf-RING_11|PF17123.1|3.9e+03,zf-RING_11|PF17123.1|1e-11,zf-RING_11|PF17123.1|2.5e+03,zf-rbx1|PF12678.3|1.5e+04,zf-rbx1|PF12678.3|5.8e-09,zf-C3HC4_2|PF13923.2|1.4e+04,zf-C3HC4_2|PF13923.2|1.8e-08,zf-C3HC4|PF00097.21|1.2e+04,zf-C3HC4|PF00097.21|3.2e-08,zf-RING_5|PF14634.2|5.3e+03,zf-RING_5|PF14634.2|8.2e-08,zf-C3HC4_3|PF13920.2|5.5e-07,zf-ANAPC11|PF12861.3|9.2e-06 R_Transcript_285190:97-765(+)
ATGGATCCCCATCGACAAGAATTCGATAAAGACTCAAACTCAGACTCGGACTTCACTCAAGGTGGCCGTTACGCCTTGAGTGGCAAAGTAATGCTAACCTCTGTCATAACTCTCTTTATAATAGTCCTATTGATCGTCTGTTTCCACGTCTACGCTCGTTGGTTCGTCCGCCGTGCCCACCACCACCATCGCCGCCGTCTCTTCAACCGTGCCGCCGCCACTATCACCACTCGCCTTTCTCTCTCCTCCCACCGTCGTGGGCTCAGCCCCTCTCTCCTCAACTCCATCCCCACCTTCACCTACTCCAAAACCCCCACGTCACCACCTCCCCTCGAGTGCCCCGTTTGCTTGTCCGAATTCGAAGACGGTGAAACGGGTCGGGTCTTGCCCAAGTGCGGTCACACCTTCCATGTTGAGTGCATTGACACGTGGTTCAAGTCCCGGTCTAGCTGCCCCGTCTGTCGTGCCCCCGTTCGGGTCGAGCCAGGACAGGTGAACCGGGTTAGGATGAGTGAACCGGGTTCGTCAGAGATGCGGTTGCCGCCACCGGTTGAGTGTCGACCAAAGGCGGTGGAGTTGGAGGGAATTGTGGTAGAGTGTAGGAATAATGATGGGTCGGACTCAAGGGTTGATGAGGGTTTGTCGTTAAAGAGGTTTGGTATTGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_285190.p1 GENE.R_Transcript_285190~~R_Transcript_285190.p1 ORF type:complete len:223 (+),score=1.34,zf-RING_2|PF13639.2|3.8e+03,zf-RING_2|PF13639.2|2.1e-16,zf-RING_11|PF17123.1|3.9e+03,zf-RING_11|PF17123.1|1e-11,zf-RING_11|PF17123.1|2.5e+03,zf-rbx1|PF12678.3|1.5e+04,zf-rbx1|PF12678.3|5.8e-09,zf-C3HC4_2|PF13923.2|1.4e+04,zf-C3HC4_2|PF13923.2|1.8e-08,zf-C3HC4|PF00097.21|1.2e+04,zf-C3HC4|PF00097.21|3.2e-08,zf-RING_5|PF14634.2|5.3e+03,zf-RING_5|PF14634.2|8.2e-08,zf-C3HC4_3|PF13920.2|5.5e-07,zf-ANAPC11|PF12861.3|9.2e-06 R_Transcript_285190:97-765(+)
MDPHRQEFDKDSNSDSDFTQGGRYALSGKVMLTSVITLFIIVLLIVCFHVYARWFVRRAHHHHRRRLFNRAAATITTRLSLSSHRRGLSPSLLNSIPTFTYSKTPTSPPPLECPVCLSEFEDGETGRVLPKCGHTFHVECIDTWFKSRSSCPVCRAPVRVEPGQVNRVRMSEPGSSEMRLPPPVECRPKAVELEGIVVECRNNDGSDSRVDEGLSLKRFGIV*

Click here to download the sequence:
Link to NCBI Protein BLAST