Transcript Information: R_Transcript_285191.p1


Annotated TAIR IDAT5G57750.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23399668-23400300 | Forward length=210
E-Value1.1E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.39615661162826
Replicate 30.32415194711536
Condition 2: 8 Hour
Replicate 10.34649808887611
Replicate 20.21095171548288
Replicate 30.51372482887888
Condition 3: 24 Hour
Replicate 10.21658308705381
Replicate 20.20806848009979
Replicate 30.51621945016267


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_285191.p1 GENE.R_Transcript_285191~~R_Transcript_285191.p1 ORF type:complete len:212 (+),score=0.13,zf-RING_2|PF13639.2|3.6e+03,zf-RING_2|PF13639.2|1.4e-16,zf-RING_11|PF17123.1|3.3e+03,zf-RING_11|PF17123.1|9.4e-12,zf-rbx1|PF12678.3|1.2e+04,zf-rbx1|PF12678.3|1.8e-09,zf-C3HC4|PF00097.21|8.7e+03,zf-C3HC4|PF00097.21|1.5e-08,zf-C3HC4_2|PF13923.2|1.2e+04,zf-C3HC4_2|PF13923.2|2.4e-08,zf-RING_5|PF14634.2|5e+03,zf-RING_5|PF14634.2|1.7e-07,zf-C3HC4_3|PF13920.2|1.2e+04,zf-C3HC4_3|PF13920.2|7.7e-07,zf-ANAPC11|PF12861.3|5.7e-06 R_Transcript_285191:97-732(+)
ATGGATCCCCATCGACAAGAATTCGATAAAGACTCAAACTCAGACTCGGACTTCACTCAAGGTGGCCGTTACGCCTTGAGTGGCAAAGTAATGCTAACCTCTGTCATAACTCTCTTTATAATAGTCCTATTGATCGTCTGTTTCCACGTCTACGCTCGTTGGTTCGTCCGCCGTGCCCACCACCACCATCGCCGCCGTCTCTTCAACCGTGCCGCCGCCACTATCACCACTCGCCTTTCTCTCTCCTCCCACCGTCGTGGGCTCAGCCCCTCTCTCCTCAACTCCATCCCCACCTTCACCTACTCCAAAACCCCTGCCTCCGCCGCCGCTTCATCACCTCCCCTCGAGTGCCCCGTCTGCTTGTCCGAATTCGAAGACGGTGAAACGGGTCGGGTCTTGCCCAAGTGCGGTCACACCTTCCATGTTGAGTGCATTGACACGTGGTTCAAGTCCCGGTCTAGCTGCCCCCTCTGTCGTGCCCCGGTTCGGATCGAGCCGGGACATGTGAACCGGATTAGGATTAGTGAACCGGGTTCTTCAGAGATGCGGTTGCCACCACCGGTTGAGTGTCGACCAAAGGCGGTGGAGTTGGAGGGAATTGTGGTAGAGTGTAGGAATAATGATGGGTCGAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_285191.p1 GENE.R_Transcript_285191~~R_Transcript_285191.p1 ORF type:complete len:212 (+),score=0.13,zf-RING_2|PF13639.2|3.6e+03,zf-RING_2|PF13639.2|1.4e-16,zf-RING_11|PF17123.1|3.3e+03,zf-RING_11|PF17123.1|9.4e-12,zf-rbx1|PF12678.3|1.2e+04,zf-rbx1|PF12678.3|1.8e-09,zf-C3HC4|PF00097.21|8.7e+03,zf-C3HC4|PF00097.21|1.5e-08,zf-C3HC4_2|PF13923.2|1.2e+04,zf-C3HC4_2|PF13923.2|2.4e-08,zf-RING_5|PF14634.2|5e+03,zf-RING_5|PF14634.2|1.7e-07,zf-C3HC4_3|PF13920.2|1.2e+04,zf-C3HC4_3|PF13920.2|7.7e-07,zf-ANAPC11|PF12861.3|5.7e-06 R_Transcript_285191:97-732(+)
MDPHRQEFDKDSNSDSDFTQGGRYALSGKVMLTSVITLFIIVLLIVCFHVYARWFVRRAHHHHRRRLFNRAAATITTRLSLSSHRRGLSPSLLNSIPTFTYSKTPASAAASSPPLECPVCLSEFEDGETGRVLPKCGHTFHVECIDTWFKSRSSCPLCRAPVRIEPGHVNRIRISEPGSSEMRLPPPVECRPKAVELEGIVVECRNNDGSN*

Click here to download the sequence:
Link to NCBI Protein BLAST