Transcript Information: R_Transcript_285361.p1


Annotated TAIR IDAT5G19520.1
Annotated Gene Namemechanosensitive channel of small conductance-like 9
Annotated Gene Symbol(s)MSL9, ATMSL9
Annotation TypeHomolog
Chromosome Positionchr5:6586079-6588771 | Forward length=742
E-Value1E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21510223347312
Replicate 20.10604192129444
Replicate 30.30850825045323
Condition 2: 8 Hour
Replicate 10.37099795374614
Replicate 20.11293374667265
Replicate 30.15279133518844
Condition 3: 24 Hour
Replicate 10.30919605693878
Replicate 20.14852026188941
Replicate 30.40532786457217


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_285361.p1 GENE.R_Transcript_285361~~R_Transcript_285361.p1 ORF type:5prime_partial len:594 (+),score=60.16,MS_channel|PF00924.14|2.5e-11 R_Transcript_285361:1-1782(+)
CAAGAGAATGAGCAAGCCAAAGTGGAAGTAGGATGGCGCAATTGGAAGAAGCGACTTGAACGAGTGCTCTTTTGGTGTGCACTTGCCATCTTCTTCATCGGCATAGCAGCAACCGTGGCATGTGTACAAGTTGCATCCCTCGGAAATCAATCCCTCGGTGGTATAATGTTGTGGCAATGGAGCCTGATTATAACGGCCGTCATAGGAGGGGCCGTTATAAGCCATGCTATACGCCAACTCATCTTGGTTATCAGCAACCTCACAAAAGATCGTAACTTAAGAGCCATAGATTTTGTGATGAATTTATTACCTAAAACTTGGGCTGTCTTCTATTTCAGCATTCTACTTATTGCTTGGACTTGGGTGGTCCATACACCAAGCTTTTTCCATCATTCCCATCAAAATATGGGAGGATCAAAGCAAGAGTATTTCCACTTCTTATTGCAAAAGAAATATGCTAATAACATAAGATTAACTCTAATTGCCATCCTTTTGGGAGCCTTCCTTGGTCTAATTAAAGATTGGCTTATTGCAAGGAATAGAAGGCAATTTCATGTAATGAGGTTCAAAGAAAGAATTATAGACTCATTGACAGAAGAATATTGGATCGTTTTACTTACCCAAAGGCCCCCTATTATTGAGGATATCACTTTCAAGTTTCGAGGGATGGAAAATGTTTGTGGATCTACTACAGAAATTCGTTGGTCAAGCTCAGATTTGGAACATAAACTTCATAAGTTGTATGATTTTGAGATGCGGATTGTAGTTAACGACATTCTTGCGGGGAGACCAATTAAGTATATAAATGAAAGAAATGAACCATGGGTTGGGATTCATGGTGAAAGGGAAGCCAAAAAAGCTGCTGGAATCATCTTCTCCAGGTTGATTGAAGCTGCTGGACCTCAACATCACAGTAGCTACCCTCACATTGACGACGACGTACTTGAAAAGGCACTTGATAATTTGCTCCCTAAGCACGCGCATAAGGTGAACCATTGGTTGCGTGGGGGAGTCCATTCACCAACCTTAAGGAAGAAAACTATCAGAAAATGCTTGATAAGGGCCGTAAAGAAACGTCAAACACTAAGAGGTGTGTTACAAAGTAACAAAAAGATTTTCCAACAACTGGACAGGATGGTGAATGTGGCACTAGTGGTTGTGATCTTCGTAGTTTGGCTTGTGTTGCTCAAAGACGAGTTCAGAAAAGCCATGCCCGTCATCGGTGGTTTCCTTGTGGGTTCAGGCTTCATAACAGGAGAGTTTCTCAAGAACCTACTAAGTAGTATTTCCTTCGTTTTTTTGGCACATCCTTTTGATGTTGGTGACTGTTGTCTAATTGAACGCACTCCGGTGACCATTGAAGCAATAGAGCTCCTTCAAACAGTCGCGGTTACATTGGACGATGAAAGGAGGTACTATCCAAACTCCTCATTAGCCAAGTTATCTATGATTAGTAACTACACAAGGAGTCCTGACGATATGGGCGACTCTGTGGCTTTCTACCTCGATGCTAGAGCAAAGGAAGACCAAATCAAGGAACTTAAATCCAAAATTAAAAGTTACATAAGGGAAAATTGCCAGCTCTGGCAAAGAGAGCACCAGTTGGTGTTGGAGCTTGATGAACAAGAAAAAAAGAACATTGTGAAGGCGACTCTGCATTTTAAACACACCATCAACTACCATGACTTCAGAGAAAGAGAGGAACGAAAGAATGGCCTTATTTTAGAGCTCACCAAATTTCTTGAGGATTCAAAACTAATGCGGGCTGCACCTCAGGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_285361.p1 GENE.R_Transcript_285361~~R_Transcript_285361.p1 ORF type:5prime_partial len:594 (+),score=60.16,MS_channel|PF00924.14|2.5e-11 R_Transcript_285361:1-1782(+)
QENEQAKVEVGWRNWKKRLERVLFWCALAIFFIGIAATVACVQVASLGNQSLGGIMLWQWSLIITAVIGGAVISHAIRQLILVISNLTKDRNLRAIDFVMNLLPKTWAVFYFSILLIAWTWVVHTPSFFHHSHQNMGGSKQEYFHFLLQKKYANNIRLTLIAILLGAFLGLIKDWLIARNRRQFHVMRFKERIIDSLTEEYWIVLLTQRPPIIEDITFKFRGMENVCGSTTEIRWSSSDLEHKLHKLYDFEMRIVVNDILAGRPIKYINERNEPWVGIHGEREAKKAAGIIFSRLIEAAGPQHHSSYPHIDDDVLEKALDNLLPKHAHKVNHWLRGGVHSPTLRKKTIRKCLIRAVKKRQTLRGVLQSNKKIFQQLDRMVNVALVVVIFVVWLVLLKDEFRKAMPVIGGFLVGSGFITGEFLKNLLSSISFVFLAHPFDVGDCCLIERTPVTIEAIELLQTVAVTLDDERRYYPNSSLAKLSMISNYTRSPDDMGDSVAFYLDARAKEDQIKELKSKIKSYIRENCQLWQREHQLVLELDEQEKKNIVKATLHFKHTINYHDFREREERKNGLILELTKFLEDSKLMRAAPQG*

Click here to download the sequence:
Link to NCBI Protein BLAST