Transcript Information: R_Transcript_285879.p1


Annotated TAIR IDAT4G37880.1
Annotated Gene NameLisH/CRA/RING-U-box domains-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:17810183-17811349 | Forward length=388
E-Value5E-94
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.47782620300311
Replicate 20.71453378380072
Replicate 30.23986112666128
Condition 2: 8 Hour
Replicate 10.70509035188402
Replicate 20.46829071918713
Replicate 30.42765574760074
Condition 3: 24 Hour
Replicate 10.78128663340354
Replicate 20.34641767890959
Replicate 30.63027421873264


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_285879.p1 GENE.R_Transcript_285879~~R_Transcript_285879.p1 ORF type:complete len:382 (+),score=69.26,CLTH|PF10607.5|3e-28,zf-RING_UBOX|PF13445.2|1.1e-18,zf-RING_5|PF14634.2|7.7e-06,zf-C3HC4_4|PF15227.2|1.2e-05 R_Transcript_285879:835-1980(+)
ATGGAGCTGAGTACAGTCAGAGGATCCTTCGAACATATAGCCAAGAAGCAGAAGTTATCTTCCTCAAGATGTCGTGAAATAGCTGACACAATTGGCCTTGAAATTGAACAGGCTTTGACAAGATGCCGGTCAAGTCATGATGCCACGCTGCCAAAATCCGTGCTTACAGAGCTGAAGACCAAGCTTAATGAATTTGGCCTACAGAAAGAGTTGGAGAGCTTGCAGAAAGAGCTGAGCATGGACATGAGCAGGTATCTTAAGCTCCTAGAGAAACAATTCATTCCTGACATATCCAAGGCATATAGAAAAGTTGACTTTGATGTCGAGACGATCAATCAGATTGTCATTAGTGATTTCTTCCGGCAAGGGCTGTTCGAAATTGGGGACTGTTTTACAGGAGAGGCTGGTACACCAGAAAATGCATTAAGAGTACAGTTATTTGAAATGTATTGGATTTTAGAAGGTGTTCGTGCTAAGAATTTACAGCCTGCCCTGAACTGGGTCGCTGTCAACCATGAAAGGCTCAAAGAAAATGCTTCGAGTCTTGAGCTAAAACTTCATCAGCTGCAGTTTGTGGAGATATTGAAGCAGGGCAGCCAAACTGATGCTCTCAACTATGCAAGAGCCAACCTAGCACCTTTTGGTCCTTCTCATATGAATGAGGTTCAAAAGCTTATGGCCTGCCTTTTATGGGTAGGAAGGCTTGAAAGCTGCCCTTATTTCCCACTTTTGGCTTCGACAAGTTGGGAGAAGTTGGCTGATGAACTATCACAGCAGTTCTGTGTGCTGTTGGGCCAGTCAAATCGTTCTTCATTGACAGTGACCATAGAAGCTGGGATCGCAGGGTTGCTTACTCTCTTGAAGCTTGCAAATCTAATGGTTGCCAAGAAACACGAATGGCATACAATGAAGCAGTTGCCAGTCCCCATTGATCTTAGTAAAGAATTCCAATTCCATTCGGTTTTTGTTTGCCCAGTAAGCAGAGATCAAGGAACCGAAGACAATCCGCCTATGTTGTTGCCTTGTGGACATGTTCTCTGCCGGCAGTCTATCATGAAACTGTCCAAGAACAACAGCAGGAACTTCAAGTGTCCCTACTGTCCGCTTGATGCTGCAGTTGCACATTGTAGGCAGCTGTTTTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_285879.p1 GENE.R_Transcript_285879~~R_Transcript_285879.p1 ORF type:complete len:382 (+),score=69.26,CLTH|PF10607.5|3e-28,zf-RING_UBOX|PF13445.2|1.1e-18,zf-RING_5|PF14634.2|7.7e-06,zf-C3HC4_4|PF15227.2|1.2e-05 R_Transcript_285879:835-1980(+)
MELSTVRGSFEHIAKKQKLSSSRCREIADTIGLEIEQALTRCRSSHDATLPKSVLTELKTKLNEFGLQKELESLQKELSMDMSRYLKLLEKQFIPDISKAYRKVDFDVETINQIVISDFFRQGLFEIGDCFTGEAGTPENALRVQLFEMYWILEGVRAKNLQPALNWVAVNHERLKENASSLELKLHQLQFVEILKQGSQTDALNYARANLAPFGPSHMNEVQKLMACLLWVGRLESCPYFPLLASTSWEKLADELSQQFCVLLGQSNRSSLTVTIEAGIAGLLTLLKLANLMVAKKHEWHTMKQLPVPIDLSKEFQFHSVFVCPVSRDQGTEDNPPMLLPCGHVLCRQSIMKLSKNNSRNFKCPYCPLDAAVAHCRQLFF*

Click here to download the sequence:
Link to NCBI Protein BLAST