Transcript Information: R_Transcript_285937.p1


Annotated TAIR IDAT3G28730.1
Annotated Gene Namehigh mobility group
Annotated Gene Symbol(s)ATHMG, SSRP1, NFD, HMG
Annotation TypeHomolog
Chromosome Positionchr3:10784954-10788498 | Forward length=646
E-Value3E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.31652533447489
Replicate 20
Replicate 30.13240888783903
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.26540817604282
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_285937.p1 GENE.R_Transcript_285937~~R_Transcript_285937.p1 ORF type:internal len:173 (+),score=54.50,HMG_box|PF00505.15|1e+04,HMG_box|PF00505.15|1.6e-20,HMG_box|PF00505.15|5.4e-14,HMG_box_2|PF09011.6|3.4e+03,HMG_box_2|PF09011.6|4.4e-14,HMG_box_2|PF09011.6|3.6e-09 R_Transcript_285937:3-518(+)
GATCAATCAGGCGACGATGCACCAAAGGCACAAACAAAGAAGCGTGCCGCAGCTGGTGAAAAGAAGGAAGCGAAGGCCAAGAAGCCACGTAAGGCTGCTGGCAAGAAGAAGAAGACTGGTCCAAAGCGTGGTTTATCAGCATATATGTTCTTCTCCAAGGAAAAGCGTCCCCAATTAAAGGAAGAAGATGAAAACTTATCATTTGGTGAATTAGGTACTGCAGTAGGTGCCGCATGGCGCGAATTATCAGCCGAAGAAAAGGCACCATATGAGAAATTAGCCAAGGCTGATAAAGCACGATATGAAAAGCGTCCCCAATTAAAGGAAGAAGATGAAAACTTATCATTTGGTGAATTAGGTACTGCAGTAGGTGCCGCATGGCGCGAATTATCAGCCGAAGAAAAGGCACCATATGAGAAATTAGCCAAGGCTGATAAAGCACGATATGAAAAGGAAAAAGCTGAATGGGATGAAAACAACCCAGAAGAAGAAGATGATAAACCAGCTAAGAAGAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_285937.p1 GENE.R_Transcript_285937~~R_Transcript_285937.p1 ORF type:internal len:173 (+),score=54.50,HMG_box|PF00505.15|1e+04,HMG_box|PF00505.15|1.6e-20,HMG_box|PF00505.15|5.4e-14,HMG_box_2|PF09011.6|3.4e+03,HMG_box_2|PF09011.6|4.4e-14,HMG_box_2|PF09011.6|3.6e-09 R_Transcript_285937:3-518(+)
DQSGDDAPKAQTKKRAAAGEKKEAKAKKPRKAAGKKKKTGPKRGLSAYMFFSKEKRPQLKEEDENLSFGELGTAVGAAWRELSAEEKAPYEKLAKADKARYEKRPQLKEEDENLSFGELGTAVGAAWRELSAEEKAPYEKLAKADKARYEKEKAEWDENNPEEEDDKPAKKK

Click here to download the sequence:
Link to NCBI Protein BLAST