Transcript Information: R_Transcript_28600.p1


Annotated TAIR IDAT3G13224.2
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:4254848-4256621 | Forward length=358
E-Value8.1E-101
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.68235368055023
Replicate 20.7849084267775
Replicate 30.96336746899707
Condition 2: 8 Hour
Replicate 10.68651957796015
Replicate 21.0449010206161
Replicate 32.2901564801423
Condition 3: 24 Hour
Replicate 11.1800742032932
Replicate 20.82449565946083
Replicate 30.92051094477606


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_28600.p1 GENE.R_Transcript_28600~~R_Transcript_28600.p1 ORF type:3prime_partial len:214 (+),score=28.79,RRM_1|PF00076.18|1.3e-12,RRM_1|PF00076.18|4.3e-16,RRM_6|PF14259.2|1.6e-11,RRM_6|PF14259.2|1.4e-13,RRM_7|PF16367.1|6e-05,RRM_7|PF16367.1|1.3e-08,RRM_5|PF13893.2|0.0033,RRM_5|PF13893.2|0.0012 R_Transcript_28600:231-869(+)
ATGGCTTCCAAATTCAAGAATGATGGCCCTCACGGTGATAGCGCCAGCCCCGGGAAGATATTCATTGGTGGCCTTCCTAAAGACACCACTCACACTTACTTTATCAAACACTTTGGGAAGTATGGAGAGATAACGGACTCGGTGATCATGAAAGACCGTATCAGTGGACATCCCAGAGGTTTTGGATTCATTACTTATGCTGATCCGTCGGTTGTCGACAATGTTATCGAGGATACTCATATCATCAATGGAAAACAGGTTGAGATCAAGCGTACAATACCCAAAGGTGCTGGACAGTCTAAGGATTTCAAAACAAAGAAGATTTTTGTAGGGGGCATTCCATCCAGTGTCTCAGAAGATGAACTTCGAAGTTTCTTCTCGCAGTATGGCAATGTGGCAGAACACCAGATTATACGTGACCATGAAACCAATCGATCTCGTGGGTTTGGCTTTATCGTGTTTGACAGTGAAGAAGTGGTTGATGAATTACCCTCAAAAGGAAATATGATTGAGATGGACGGTACTCAGGTTCAACACCTTGGATTATTTTTGCGAGATGGGACAAGAAGAGATAAGTGCAAGTGGAACATCATATCTGAACCGCACAGAAGCAGCAAATGTCGAGAAAATAGTAACTAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_28600.p1 GENE.R_Transcript_28600~~R_Transcript_28600.p1 ORF type:3prime_partial len:214 (+),score=28.79,RRM_1|PF00076.18|1.3e-12,RRM_1|PF00076.18|4.3e-16,RRM_6|PF14259.2|1.6e-11,RRM_6|PF14259.2|1.4e-13,RRM_7|PF16367.1|6e-05,RRM_7|PF16367.1|1.3e-08,RRM_5|PF13893.2|0.0033,RRM_5|PF13893.2|0.0012 R_Transcript_28600:231-869(+)
MASKFKNDGPHGDSASPGKIFIGGLPKDTTHTYFIKHFGKYGEITDSVIMKDRISGHPRGFGFITYADPSVVDNVIEDTHIINGKQVEIKRTIPKGAGQSKDFKTKKIFVGGIPSSVSEDELRSFFSQYGNVAEHQIIRDHETNRSRGFGFIVFDSEEVVDELPSKGNMIEMDGTQVQHLGLFLRDGTRRDKCKWNIISEPHRSSKCRENSNY

Click here to download the sequence:
Link to NCBI Protein BLAST