Transcript Information: R_Transcript_28610.p1


Annotated TAIR IDAT3G51130.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0183 (InterPro:IPR005373); Has 269 Blast hits to 265 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 82; Plants - 37; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18994219-18997180 | Forward length=410
E-Value2E-258
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 135.218000090248
Replicate 221.404987529024
Replicate 328.424418914934
Condition 2: 8 Hour
Replicate 129.073241105245
Replicate 239.988438329127
Replicate 347.079359905919
Condition 3: 24 Hour
Replicate 134.74393210616
Replicate 225.32866714441
Replicate 332.91143916424


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_28610.p1 GENE.R_Transcript_28610~~R_Transcript_28610.p1 ORF type:complete len:411 (+),score=57.06,UPF0183|PF03676.10|5.8e-137 R_Transcript_28610:202-1434(+)
ATGTTGCATCATCATCATCAACAACAACAGCAAAGAGCAAGGCGCCGTTGTGAAGGCACTGCTATGGGAGCCATTGTTCTCGATCTTCGTCCCGGTCTCGGCATCGGCCCTTTCACCCTCGGAATGCCGATATGCGAAGCCTTTGCTCAAATTGAACAACAACCTAATATTTATGATGTTGTGCACGTCAAGTATTTTGATGAGGAGCCCTTAAGATTGGACATTGTCATTAGCTTTCCTGATCATGGGTTTCATCTCCGATTTGATCCTTGGTCTCAGAGACTGCGCCTTATTGAAATTTTTGATGTTAAAAGGCTTCAGATGCGGTACGCGACCTTGCTGATTGGAGGACCAACCACTCTTGCTACCTTTGTAGCTGTATATCAGCTTTTTGGCCCAACTTATCCAGGGACTTATGACAAAGATAGAGGTGTTTATACTTTGTTTTATCCGGGATTATCCTTTGCTTTTCCTATCCCAACCCAGTATACAGATTGCTGCAATGACAGAGAAGCGGAGTTACCACTCGAATTTCCTGACGGTACTACGCCTGTCACATGTCGTGTCTGCATATATGATAGTTCTATGGGAAAGAAGGTAGGAGTTGGATCATTAATGGACAAGGCTGTTGTCCCTGCACCACCTGCTGGTAGCCTCTACATGGAAGAGGTGCATGTTAAGCTGGGAGAGGAATTATGGTTTTCAATTGGTGGACAGCATATACCATTTGGGGCATCACCACAGGATGTTTGGACTGAATTGGGCCGGCCATGTGGGATACATCAAAAGCAGGTTGACCAAATGGTCATTCACTCAGCCTCTGATCCACGTCCACGAACAACTCTCTGTGGAGATTACTTCTACAATTACTTCACTCGTGGCTTGGACATATTATTTGATCGACAGACGCACAAAATCAAGAAATTTGTTCTCCATACAAACTATCCTGGGCATCCTGACTTCAACTCATATATAAAGTGTAATTTTGTCATCCATTGTTCTGAATTTGGAGACTCATTCTCAGATGTTAGCAGTGCAAAGCAGTGCATTACCCCAAGCACCAAATGGGAGCAGGTGAAGGAAATCCTTGGGGATTGTGGCCGGGCTGCTATACAAACGCAAGGTTCCACAAATAATCCTTTTGGATCTACTTTTGTTTATGGTTATCAAAATGTTGCATTTGAGGTCATGAAGAATGGTTATATTGCCACTATAACTCTGTTTCAGTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_28610.p1 GENE.R_Transcript_28610~~R_Transcript_28610.p1 ORF type:complete len:411 (+),score=57.06,UPF0183|PF03676.10|5.8e-137 R_Transcript_28610:202-1434(+)
MLHHHHQQQQQRARRRCEGTAMGAIVLDLRPGLGIGPFTLGMPICEAFAQIEQQPNIYDVVHVKYFDEEPLRLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRYATLLIGGPTTLATFVAVYQLFGPTYPGTYDKDRGVYTLFYPGLSFAFPIPTQYTDCCNDREAELPLEFPDGTTPVTCRVCIYDSSMGKKVGVGSLMDKAVVPAPPAGSLYMEEVHVKLGEELWFSIGGQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDPRPRTTLCGDYFYNYFTRGLDILFDRQTHKIKKFVLHTNYPGHPDFNSYIKCNFVIHCSEFGDSFSDVSSAKQCITPSTKWEQVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEVMKNGYIATITLFQS*

Click here to download the sequence:
Link to NCBI Protein BLAST