Transcript Information: R_Transcript_286180.p1


Annotated TAIR IDAT4G18520.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:10215250-10217103 | Reverse length=617
E-Value3E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.16669370734903
Replicate 20
Replicate 30.1045969753249
Condition 2: 8 Hour
Replicate 10.11180760249884
Replicate 20.10210448329308
Replicate 30.082884066759758
Condition 3: 24 Hour
Replicate 10
Replicate 20.20141788941166
Replicate 30.69960699912457


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_286180.p1 GENE.R_Transcript_286180~~R_Transcript_286180.p1 ORF type:3prime_partial len:219 (+),score=9.14,PPR|PF01535.16|3,PPR|PF01535.16|1e+02,PPR|PF01535.16|0.0019,PPR|PF01535.16|7,PPR_1|PF12854.3|20,PPR_1|PF12854.3|0.51,PPR_1|PF12854.3|0.87,PPR_1|PF12854.3|12,PPR_2|PF13041.2|13,PPR_2|PF13041.2|4.5,PPR_2|PF13041.2|2e+02,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|1e+02,PPR_3|PF13812.2|3.4,PPR_3|PF13812.2|3.7e+03,PPR_3|PF13812.2|2.8e+03,PPR_3|PF13812.2|0.44,PPR_3|PF13812.2|8.3e+02 R_Transcript_286180:44-655(+)
ATGTCGTATACGAATAGGACGCTCAAAACGAGTCCAGTAAAACCCTTTGCTACAACTGCTAATTTGCTGAACATGGTCGACTTTGATACCCAACAAACACCAAATTTCAAAGACCCACGTTCAATACACGCCCACATAATCAAAACATCAAACACAGATAATTCCCTTCCGTTGCTGAACAAGCTCATCACTTTCTACTCAAAATCCAACCTCTTTTCCGATGCCATTGCCGTTTTCCGTCAAATCCCATTTCCCAATGTTGTCTCTTGGACTGCCCTTATCTCCGGCAACCCCAATTCCCCACTATCTCTCCACCATTTCATCTCCATGCTTCGCTACCCAACCAGGCCTAATGAACGAACTTTAGCATCAGTTCTCAAGACATGTGCTTCTCTTTATGCTCTATCCTTTGGCCAACAAATACATTCCCTTTCCCTAAAGCTTTGCCTCGCATCCGAGCCATTTTGCGCGTCTGCCTTCGTTCATTTGTATGCTAAATGCAGGTTCCCTGATGATGCCCGCAAGGTGTTCGACGAGATGCCTGAAAGAGATGAAGTTTGTTATTCGTCTGTTATTGTTGGGTTTGCTCAGAATTCTCGTCCTATTGATGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_286180.p1 GENE.R_Transcript_286180~~R_Transcript_286180.p1 ORF type:3prime_partial len:219 (+),score=9.14,PPR|PF01535.16|3,PPR|PF01535.16|1e+02,PPR|PF01535.16|0.0019,PPR|PF01535.16|7,PPR_1|PF12854.3|20,PPR_1|PF12854.3|0.51,PPR_1|PF12854.3|0.87,PPR_1|PF12854.3|12,PPR_2|PF13041.2|13,PPR_2|PF13041.2|4.5,PPR_2|PF13041.2|2e+02,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|1e+02,PPR_3|PF13812.2|3.4,PPR_3|PF13812.2|3.7e+03,PPR_3|PF13812.2|2.8e+03,PPR_3|PF13812.2|0.44,PPR_3|PF13812.2|8.3e+02 R_Transcript_286180:44-655(+)
MSYTNRTLKTSPVKPFATTANLLNMVDFDTQQTPNFKDPRSIHAHIIKTSNTDNSLPLLNKLITFYSKSNLFSDAIAVFRQIPFPNVVSWTALISGNPNSPLSLHHFISMLRYPTRPNERTLASVLKTCASLYALSFGQQIHSLSLKLCLASEPFCASAFVHLYAKCRFPDDARKVFDEMPERDEVCYSSVIVGFAQNSRPIDA

Click here to download the sequence:
Link to NCBI Protein BLAST