Transcript Information: R_Transcript_28641.p1


Annotated TAIR IDAT1G55540.2
Annotated Gene NameNuclear pore complex protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:20734759-20743049 | Reverse length=1819
E-Value1E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.4753434749388
Replicate 24.9387184783837
Replicate 35.8591783825634
Condition 2: 8 Hour
Replicate 15.9168928150155
Replicate 27.0704073688067
Replicate 35.6927930480391
Condition 3: 24 Hour
Replicate 16.9935736670513
Replicate 25.584686377177
Replicate 37.1458573142313


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_28641.p1 GENE.R_Transcript_28641~~R_Transcript_28641.p1 ORF type:complete len:778 (+),score=198.38 R_Transcript_28641:80-2335(+)
ATGGTATCACAACTAGCTGCTTCACAGCAGCTCTCTGAATATTTGTCCAGACAAATGGCTGTCCTGGGCATAAAATTATCTCCGGAAAAACAAGAAAATGTCAAAAAGCAATTGTTTGAGTCAATTGGAATATCTGATCACAGTGACTATCCTGGTTTCCCAAACACAGGAAAGGTGATCAACTCCTCATCAAACAAAAAGCTATTTGTTTCCAGCTCAGATAACGCACATAATGAGTCCAGGAGGAATCAATTAAGTAGTTTGAGTTATCATGATCCTGAAACTGCAAGGAGAAGGAGAGATTCACTTGATCGGAACTGGGCAAACTTTGAGGCTCCTAAAACAACAGTCAAAAGGATGCTGGTAGAAAATCAACATCAGAATGTGATTGCTTCATTCTCTTCATTGGACAAGCAACTTAGCAGCCCACGCAAGCTAGAACCTGCAACATCTTCATATCCAAAGGCTCTTCCTGTGCGAAATAGGAGCGGATGCATGGATGTCCTGAAGAAACTCAATTCCGAAGATATGGCATCTTCCATATTCAAATGGGCTGGAGAAATCCCTGAAGTGTCACGAGTTCAAACTGAGGAAACTTCTAGACTGCAAGCTTTACAAGGAAGCAACTATTCAGCAATCCAAAACTCAGCTACTTTGACATCAGATTTATCATCACAGTCATCATCTCCAAGATTATTGGATCTGAATATAAAGAAGGAAAATAATCACTCCTCTGCTGGTGTACCATGGACTGAGAGAGGACATGGTGATAAGTCCAAATCAGCTATAATTAAGGACTTAAAACCTTCTGAATCCCAGAATGGTTATGAAAATTCGACCATTCAAAGGCTGCAACCAAAACTACTGTCCTCACCAAAAAAATGCAGCGAGATGCCTATTTCTGCGCTACCTAGTGGTGGTAGAAGCTCATTGCTTCCATCTACTCATGATGCTGTATCCTCTACTTCAGAAACCCCGCCTATGAGGCTGTCATCAGTCTCTGCCTCTTCATCATCTTCTCAGAGTGTGCAGGCCTTACCATTTACGTCCGTAGAGGGTGGATCTATAACCAGTGCGAAGACGGTCAAGGATACCAACAGTCCAATGTTGCAACTTCAACCATCGTCGTCTTTTGCTTCTCCCTCGATACTACATGATAGTTTCTTTTCTTCCAAGGATCCAAAGATCAAAGAGTCCCATTCTATGGCATCTTCCACAAATTCAGTAGGGCAATCTCCAAAAATAGATCCTCAACCTACTCTCAACAAGGTTGGTTCAGACACTCCAGCAAGTCCAGCTTCAACTCCACTGCCTCCTCAGAAGTTGGAGTCTTCAGTCATTGATGGCTTGAAGTTTGAATCTTTGACGCCATCTGCTCGTTCAAGTGACATCCCGAAAGAAGCTCCTTCTGGAAGCCCTCATGCTCTCAGTAGAACTGTGACACTTGCATCTGATGTGGTAACGAATACTCCATCAGAAAAGAATTCTCCAGCATACACGTTGCCTGCAGCTACGCTCTCAGATTCTGATGGTTACACTGGTGGAAAGAACATTGTTGATGCAGCAGTAACTCAGGAGGATGAAATGGAGGAAGAAGCACCCGAGCCAAACTCTACTGCAGACCTTTCTCTAGGAGGCCTTGCTGGGTTTGGATTAGGGTCAGTGCCCAGCACTACAGCATCTAAATCGAATCCATTTGGTGTTTCAGTTAGTAGTGCAACAGTAAATACATCAAGTTCAATATCTTTGCCCGTTCCCTCTGGAGAGCTCTTCCGTCCCGCATCTTTTAGCTTCCAATCTTTGCAGACTTCCCAACAGTCACAGCCTGCCAGTATAGGAGCTACTAGTGCTGCATTTGGTTCTGCAATTCCTCCACAACAGCCTTCCTCCAGTGGTTTCGGGCAGCCAGGGCATATTGGCATGGGACAAGCAGCTTTGGGTTCAGTTCTTGGTTCGTTTGGCCAATCAAGACAATTTGGTGCCGCCTTGCCTGGCAGTGGTTTTGGGGGTAATCAGTCTGCTGGTGGCTTTCTAAATGCACCCACTGGTGGAGGCTTTGCCAGCGTTGCTCCCACTGGTGGGGGGTTTGCAGGCCTTGGCGCCACAGCCAGTGGCTTTGCAGCTGCTGGTGCTGGGGCTACCGGAGGTGGTGGATTTGGAGCTTTCAGCAAACAAGGGAGTAGCGGGTTTTCTGGACTTGGCAGTGGTGCTGGGGGAGGACAGCCATCATCGCTGTTCACGCAGATAAGGAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_28641.p1 GENE.R_Transcript_28641~~R_Transcript_28641.p1 ORF type:complete len:778 (+),score=198.38 R_Transcript_28641:80-2335(+)
MVSQLAASQQLSEYLSRQMAVLGIKLSPEKQENVKKQLFESIGISDHSDYPGFPNTGKVINSSSNKKLFVSSSDNAHNESRRNQLSSLSYHDPETARRRRDSLDRNWANFEAPKTTVKRMLVENQHQNVIASFSSLDKQLSSPRKLEPATSSYPKALPVRNRSGCMDVLKKLNSEDMASSIFKWAGEIPEVSRVQTEETSRLQALQGSNYSAIQNSATLTSDLSSQSSSPRLLDLNIKKENNHSSAGVPWTERGHGDKSKSAIIKDLKPSESQNGYENSTIQRLQPKLLSSPKKCSEMPISALPSGGRSSLLPSTHDAVSSTSETPPMRLSSVSASSSSSQSVQALPFTSVEGGSITSAKTVKDTNSPMLQLQPSSSFASPSILHDSFFSSKDPKIKESHSMASSTNSVGQSPKIDPQPTLNKVGSDTPASPASTPLPPQKLESSVIDGLKFESLTPSARSSDIPKEAPSGSPHALSRTVTLASDVVTNTPSEKNSPAYTLPAATLSDSDGYTGGKNIVDAAVTQEDEMEEEAPEPNSTADLSLGGLAGFGLGSVPSTTASKSNPFGVSVSSATVNTSSSISLPVPSGELFRPASFSFQSLQTSQQSQPASIGATSAAFGSAIPPQQPSSSGFGQPGHIGMGQAALGSVLGSFGQSRQFGAALPGSGFGGNQSAGGFLNAPTGGGFASVAPTGGGFAGLGATASGFAAAGAGATGGGGFGAFSKQGSSGFSGLGSGAGGGQPSSLFTQIRK*

Click here to download the sequence:
Link to NCBI Protein BLAST