Transcript Information: R_Transcript_287136.p1


Annotated TAIR IDAT1G56440.2
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)TPR5
Annotation TypeHomolog
Chromosome Positionchr1:21138765-21141482 | Reverse length=494
E-Value2E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4087855770421
Replicate 21.2682329110516
Replicate 31.614233186306
Condition 2: 8 Hour
Replicate 11.3146773126038
Replicate 20.90043819494707
Replicate 31.5227861258714
Condition 3: 24 Hour
Replicate 11.617832052959
Replicate 22.294339012107
Replicate 31.7627681627031


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_287136.p1 GENE.R_Transcript_287136~~R_Transcript_287136.p1 ORF type:complete len:298 (+),score=74.12,TPR_11|PF13414.2|5.1e-14,TPR_11|PF13414.2|2.1e-07,TPR_1|PF00515.24|0.00088,TPR_1|PF00515.24|4.6e-07,TPR_1|PF00515.24|0.048,TPR_2|PF07719.13|0.024,TPR_2|PF07719.13|0.00014,TPR_2|PF07719.13|0.067,TPR_12|PF13424.2|0.26,TPR_12|PF13424.2|2.7e-06,TPR_10|PF13374.2|0.35,TPR_10|PF13374.2|0.0013,TPR_10|PF13374.2|3.7e+03 R_Transcript_287136:68-895(+)
ATGGATACATTTTCTTCTCTCCCTATTGTGGCAGCTGTTCCAGTTTCTTCTCTCCCTCCAGAAAATCAAAATGAAGAAATTCATGTCGTCCCAGAAGAAAAAAGGACAAAAAAACTTAGTGACTCAGAGAGACAGAGAATTGTTGACATTGTTCTTCTCAATTCAAAGAGGAAATCATTTGGAGAAATTAAAGCTGAAAGAGGCATAATGAAGAAATTAGCATTGGAATTCAAGGTCTCGACTCATACAGTGAGCAACATATGGAGAAAAGCAAAGCAGCAAATGCAAGACGGGGTTGCCATAGATGTAAAGAGTCGAATGCCAGGGAATGTAGGGAGAAAAAGGATTCAGATGGACTTTGGTAAAATTGAAGATATCCCGCCTCACAAAAGAACTAGTATTAGAGCATTGGCAAGTGCAATGAATATGCCCTCGTCGACACTCTATCGAGCCATGAAAAGAGCTGCAACCTCAGAAAAAGACATTGGCAATGACTATTACAAGCAAAAGAAATTCGAGGAAGCAATTCTATGGTACTCAAATAGCCTCACCCGCTCAAGAACAGCTGTAGCATATGCAAATAGAGCGGCTGCTTATCTCAAAGTCGGTAGATACTCGGAAGCTGAGAGTGACTGTACTGAGGCCTTGAACATTGATAAACACTACCTGAAACCGTATGCACGCAGAGCAATGGCCAGGAAAGAACTTGGAAAGCTTAAGGATGCAAAGGAAGATGCAGAGCTTGGCTTGAAGTTGGAACCAGAGCACCATGAAATCTTGAAACTGTATGTGGAGATCAACTCTTTGCTTGAAAAGGAAACTGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_287136.p1 GENE.R_Transcript_287136~~R_Transcript_287136.p1 ORF type:complete len:298 (+),score=74.12,TPR_11|PF13414.2|5.1e-14,TPR_11|PF13414.2|2.1e-07,TPR_1|PF00515.24|0.00088,TPR_1|PF00515.24|4.6e-07,TPR_1|PF00515.24|0.048,TPR_2|PF07719.13|0.024,TPR_2|PF07719.13|0.00014,TPR_2|PF07719.13|0.067,TPR_12|PF13424.2|0.26,TPR_12|PF13424.2|2.7e-06,TPR_10|PF13374.2|0.35,TPR_10|PF13374.2|0.0013,TPR_10|PF13374.2|3.7e+03 R_Transcript_287136:68-895(+)
MDTFSSLPIVAAVPVSSLPPENQNEEIHVVPEEKRTKKLSDSERQRIVDIVLLNSKRKSFGEIKAERGIMKKLALEFKVSTHTVSNIWRKAKQQMQDGVAIDVKSRMPGNVGRKRIQMDFGKIEDIPPHKRTSIRALASAMNMPSSTLYRAMKRAATSEKDIGNDYYKQKKFEEAILWYSNSLTRSRTAVAYANRAAAYLKVGRYSEAESDCTEALNIDKHYLKPYARRAMARKELGKLKDAKEDAELGLKLEPEHHEILKLYVEINSLLEKETV*

Click here to download the sequence:
Link to NCBI Protein BLAST