Transcript Information: R_Transcript_287302.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value4E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.090184006284065
Condition 2: 8 Hour
Replicate 10.096401043099391
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.086831727915659
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_287302.p1 GENE.R_Transcript_287302~~R_Transcript_287302.p1 ORF type:5prime_partial len:254 (-),score=5.47,rve|PF00665.22|9.5e+03,rve|PF00665.22|3.1e-17,gag_pre-integrs|PF13976.2|1.2e-08,gag_pre-integrs|PF13976.2|1e+04 R_Transcript_287302:314-1075(-)
TATTTCCTTGTGAAGGATCACCAATCGGGAGCAATCCTCTTCAAGGGACAAGTCAAATCAGGAACATATGAAGTTCAATTCAACTCTCCTACAGTCTATGCAAGTCACAAATCCACCTCTCTTGATTGGCATCATCGTTTAGGCCATCCCTCTCAACATGCTTTTAGACAACTTATTTCCAAAAATAAACTCAATGTCTCCGGTATCTCAACTTTAGATTGTACCTCATGTGCTTGCAATAAAAGCCATAAATTACCATTCTCTATCTCCTCTATTACTTCTACTACTCCTTTGCAATATGTTTACACTGATTTATGGACTGCTCCTATCTACTCTCATGATGGTTACAAATACTATATAATTTTTGTTGATCACTACACCAAATATATTTGGCTATACCACTTAAAACAAAAGTCAGACACGAAAAATATCTTTATTCGATTCAAAGCTCTAGTCGAAAAATATTTCCAACTACCTCTTAAAACCCTCTATTCTGACAATGGGGGAGAATGTGAAACATTAAACACCTACCTGTCCATCAATGGCATTTCTCACCTCACAACCCCCCCTCATACTCCTCAACACAATGGCTACTCCGAACATCGCCATCGCCATATTGTTGAAACAGCTCTTACCCTATTAACCCATGCTAAAATGCCCTTGACGTATTGGACAAATGCTTGCTCCACAGCAGCCTATCTCATAAACCGCTTACCAACACCAACCTTACATAATGAATCTCCATACTTAACCAAACTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_287302.p1 GENE.R_Transcript_287302~~R_Transcript_287302.p1 ORF type:5prime_partial len:254 (-),score=5.47,rve|PF00665.22|9.5e+03,rve|PF00665.22|3.1e-17,gag_pre-integrs|PF13976.2|1.2e-08,gag_pre-integrs|PF13976.2|1e+04 R_Transcript_287302:314-1075(-)
YFLVKDHQSGAILFKGQVKSGTYEVQFNSPTVYASHKSTSLDWHHRLGHPSQHAFRQLISKNKLNVSGISTLDCTSCACNKSHKLPFSISSITSTTPLQYVYTDLWTAPIYSHDGYKYYIIFVDHYTKYIWLYHLKQKSDTKNIFIRFKALVEKYFQLPLKTLYSDNGGECETLNTYLSINGISHLTTPPHTPQHNGYSEHRHRHIVETALTLLTHAKMPLTYWTNACSTAAYLINRLPTPTLHNESPYLTKL*

Click here to download the sequence:
Link to NCBI Protein BLAST