Transcript Information: R_Transcript_287397.p1


Annotated TAIR IDAT5G60710.1
Annotated Gene NameZinc finger (C3HC4-type RING finger) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24410953-24414849 | Reverse length=704
E-Value2E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.26695372511472
Replicate 20.07676892291151
Replicate 30.12563110198987
Condition 2: 8 Hour
Replicate 10.35811137034362
Replicate 20.081758251704518
Replicate 30.19910358998596
Condition 3: 24 Hour
Replicate 19.6531913388884
Replicate 20.88704880364296
Replicate 30.440154938859


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_287397.p1 GENE.R_Transcript_287397~~R_Transcript_287397.p1 ORF type:complete len:547 (+),score=77.50,VWA|PF00092.24|3.8e-18,VWA_2|PF13519.2|3.5e-18,VWA_3|PF13768.2|6.3e-16,VWA_CoxE|PF05762.10|3e-06,Vwaint|PF14624.2|5.5e-06 R_Transcript_287397:56-1642(+)
ATGACTTACAACGATGATCTTCAGCCAATTTTGCCAACTCAAAATGCAGGGCCGGACACGGGGGGAGCGGGAGCCATAGCGACGGTCATAAAGTCGGCTGAAGAGGCAGTACTGGAAGCAACAGAGTTCCAGGTGATGTTGAAGCTGAAAGCAAACAACGTTCAGCGACACGGAGTGGATATCGTGACGGTGCTAGACGTTAGTGCGAGTATGAACGGAGAAAAGCTTGAGAACATGAAAATCGCCATGGATTTCTTAATCTTGAAACTTAGCCCGATCGATCGATTATCGATCGTAACATTCGGGGAGGTTGCAGAGAGGTTGTTTCCATTGACACCGATGGACGACAAAGCTAAGGAGGATATGAGAAATAAGGTCAAAAGCTTACCTGCTGATGGTAGGTCAACAAACATGCAAGCTGGCCTTGAACGGGCCTTACAAGTTCTCAATCAACGCAGTTTTAACACCGGCCGTGCCATTGCCGTCATGCTTATGTCTGACGGCATGGAGAATGGTAACAGCAAGGTTTCCCAGGTCGACGTTAGCACTCTACCTGTCTATACTTTTGGTTTTGGTGGGGTCGATGCCAATGGTGTCCCTGAAAAATATGACGCTCTGGTGCTGGGTGAAATCGCACGTAAGAGCAAAGCAGGAACCTTTAATATGGCGGATACAACAAGACAGCACTCAGGAAGCTTGAACGAAGTATTTTCTGCATGTTTGGGTGGGCTTCTCAAGATTGCTGTACGGGACCTTGTGGTGACTATCAAACAAGAAACACCAAATTCCACTCTCAAAAAAGTGAGTGCTGAAACTTATATCAAAGAGAATGATGGTCTCGGTTCTGTTACTTTCTCCTTTGGCGATATCTATGTGGGAGAGGAGCGTTTGGTTGTAGTCGACCTTTTTCTCCCCGCTGTGCCAGCTCCTATCAACCCTGTTGTACTTCGAATCGAGTACACCTACAGCACTGCAAACGGAACATTCAGCGAGCGACCTATAAGGTATCCCGTGGAACGCAAGGGGACGGTGAGCAAGGGCAATGGCAATAACAATGAGAATGGAGAGCTTGGGGACATTGGACTTGAGATGACGCGTATCGAATTTGTGAATGCGGTGAAAAGAGCTAGAGAGTTAGCTGACAATAACAAGCTAGATGATGCTAGAGAGATACTTAATGAAGAACTAAACAAGCTTTGGAGCCTTGAACCTACGCCCGCCATCGAGACTTTCAGATATGAGGTGGACCGTCTCTTGGCTTACATGGAAGACCCAGAAACTTACGAAAAGCTTGGCCGTCCATTTGCAATCTCCTTTGAGACTTCTCATGATCGTCAGCGTTTCGCTGCAAGAGGTGATATGTCTAAGCAACGGATGTTTATAACTCCAAATGCTGCCAAAGTGCTTGAGCAAGCCCAGATCTTTGAGGAGGACCCTGATGTACCTCCACCCACTGCCGAGGAAGATGAAAAGAAAGAAATTGAAAGTGATCCTCTCGCTAGAATTCGTGGTCCTCTTGCTTACCATCTCAACGTTGCTATACAGTCTCTCATGGACATCCGCGACCTACTCTCTCCCCAAATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_287397.p1 GENE.R_Transcript_287397~~R_Transcript_287397.p1 ORF type:complete len:547 (+),score=77.50,VWA|PF00092.24|3.8e-18,VWA_2|PF13519.2|3.5e-18,VWA_3|PF13768.2|6.3e-16,VWA_CoxE|PF05762.10|3e-06,Vwaint|PF14624.2|5.5e-06 R_Transcript_287397:56-1642(+)
MTYNDDLQPILPTQNAGPDTGGAGAIATVIKSAEEAVLEATEFQVMLKLKANNVQRHGVDIVTVLDVSASMNGEKLENMKIAMDFLILKLSPIDRLSIVTFGEVAERLFPLTPMDDKAKEDMRNKVKSLPADGRSTNMQAGLERALQVLNQRSFNTGRAIAVMLMSDGMENGNSKVSQVDVSTLPVYTFGFGGVDANGVPEKYDALVLGEIARKSKAGTFNMADTTRQHSGSLNEVFSACLGGLLKIAVRDLVVTIKQETPNSTLKKVSAETYIKENDGLGSVTFSFGDIYVGEERLVVVDLFLPAVPAPINPVVLRIEYTYSTANGTFSERPIRYPVERKGTVSKGNGNNNENGELGDIGLEMTRIEFVNAVKRARELADNNKLDDAREILNEELNKLWSLEPTPAIETFRYEVDRLLAYMEDPETYEKLGRPFAISFETSHDRQRFAARGDMSKQRMFITPNAAKVLEQAQIFEEDPDVPPPTAEEDEKKEIESDPLARIRGPLAYHLNVAIQSLMDIRDLLSPQI*

Click here to download the sequence:
Link to NCBI Protein BLAST