Transcript Information: R_Transcript_287467.p1


Annotated TAIR IDAT5G58170.1
Annotated Gene NameSHV3-like 5
Annotated Gene Symbol(s)SVL5
Annotation TypeHomolog
Chromosome Positionchr5:23540261-23543092 | Reverse length=750
E-Value8E-107
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.62941244671444
Replicate 20.72401035918269
Replicate 30.48608461742498
Condition 2: 8 Hour
Replicate 10.97423865837846
Replicate 20.77106489107537
Replicate 31.1073926903684
Condition 3: 24 Hour
Replicate 10.85254456548503
Replicate 21.1700402594471
Replicate 30.812806009593


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_287467.p1 GENE.R_Transcript_287467~~R_Transcript_287467.p1 ORF type:complete len:377 (+),score=79.31,GDPD|PF03009.13|5.3e-17 R_Transcript_287467:1768-2898(+)
ATGGATGGGGCCGACATAATCGACTGTTCAGTCCAAATGTCAAAGGATGGGGTTGCATTCTGCCTAGACACAGCTGATCTTCTTGGAGATACTAATGCCATCACTCTCTTCATGTCTCGATCCTCTAGTGTTCCTGAAATCCAACCAAAGAATGGCATCTTTTCATTTGATCTCACTTGGAGCGAGATTCAAACCTTGAAACCACAACTGGTAGGCCCAATATCAACAGAATCCGGAGGCTTGCCAAGGAATCCAGCAAACAAGAACATGGGTAAATTGTTGACCCTAGCAGAGTTTCTTGACCTTGCCAAGGTCAAGGCAGTGTCTGGAGTTCTAATCAACATACAGAATGCAGCCTACCTTGCTTCAAAGAAAGGTCTAGACATAGTAAATGCTGTCACAACTGCCTTGAGCAATGCTACATTTGACAAACAATCAACCCAGCAAGTTCTTATCCAATCAGATGACACATCAGTACTAGCTGCATTTAAGGATGTTCCAACATATCGGAGAGTATATGATATTCAGAAGGCAATAAGTGAAGCACCCAAACAATCAGTGGACGAAATCAAGAAGTATGCAGACAGTGTTAACATTAGGAGGCCTTCCATATTCAGTACTACAGCCTTCTTCCTCACCAACTTCACCAAAGTTGTTGAGCAGATGCATGCTGGGAATCTCTCAGTGCATGTCTCAACTCTATACAATGAGTACAGCACCCTTGCATTTGATTTCTTCGCAGATCCTATGATTGAATTGGCCACTCTTATTGAGGGACTCAATGTCGATGCAGTTGTGACAGACTATCCAGCTACTGCCAGTGCTTACATTAGGAGTCCATGCTCGGATCCAAGCAATACAAAGATCGAGTACCCCATTGCTCCAGTGGATGCTGGGAGTTTACTGGAGTTAGCTTCACAAGCCCTTCCACCAATAGCAGCACCGGCACCAAGTCTTGACCCGGCTGGTGTTGTAGACCCACCTCTACCTCCTGTGTCTAAGGCCGAAACCCCTGCTCCTGCCGCACCTGCACCTCAGCAGAAGAATGCAGGCAGTCAGAGGAGCAACACCAGCCTGTGCTTGTCCTTGCTGGCAGCTCTGTTTGTCTGCTTGCTTCTGACAGGACACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_287467.p1 GENE.R_Transcript_287467~~R_Transcript_287467.p1 ORF type:complete len:377 (+),score=79.31,GDPD|PF03009.13|5.3e-17 R_Transcript_287467:1768-2898(+)
MDGADIIDCSVQMSKDGVAFCLDTADLLGDTNAITLFMSRSSSVPEIQPKNGIFSFDLTWSEIQTLKPQLVGPISTESGGLPRNPANKNMGKLLTLAEFLDLAKVKAVSGVLINIQNAAYLASKKGLDIVNAVTTALSNATFDKQSTQQVLIQSDDTSVLAAFKDVPTYRRVYDIQKAISEAPKQSVDEIKKYADSVNIRRPSIFSTTAFFLTNFTKVVEQMHAGNLSVHVSTLYNEYSTLAFDFFADPMIELATLIEGLNVDAVVTDYPATASAYIRSPCSDPSNTKIEYPIAPVDAGSLLELASQALPPIAAPAPSLDPAGVVDPPLPPVSKAETPAPAAPAPQQKNAGSQRSNTSLCLSLLAALFVCLLLTGH*

Click here to download the sequence:
Link to NCBI Protein BLAST