Transcript Information: R_Transcript_287681.p5


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value1E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9556743880056
Replicate 20.59989429760852
Replicate 31.6361955425823
Condition 2: 8 Hour
Replicate 10.34979807067493
Replicate 21.4374852612191
Replicate 32.2041241467613
Condition 3: 24 Hour
Replicate 11.6398433734074
Replicate 21.5753756350412
Replicate 31.407066729872


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_287681.p5 GENE.R_Transcript_287681~~R_Transcript_287681.p5 ORF type:complete len:140 (+),score=20.49,gag_pre-integrs|PF13976.2|2.6e-16 R_Transcript_287681:1558-1977(+)
ATGGAATTGGTTTCCAAGGTTGATATGACACGGAATCATCTCTTCACTATCGACATTGAATCTGGAGAAGCGAAGTGCATGAAGACATCCATCAAAGACGATTCATGGCTTTGGCATTTGAGGTATGGTCATCTTGGATTTTCTGGCCTAAAGCTGTTGGCTAAAGAAAATATGGTGAACGGACTGCCAAAAATAAATCCACTTGATCAATTATGCGAAGCCTGCATCAAAGGGAAACAACACGGGCAAAATTTTGAATTTGGCAAGTCTAGAAGAGCTAGAAGACCACTAGAGATTGTGCACTCAGATCTAGCTGGTCCATTTGACATACCATCACTTGGAGGAAACAGGTATTACCTAACTTTTATTGATGACTTTAGTAAAAAAAAAGTTGGGTATACATTCTTAAAGAAAAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_287681.p5 GENE.R_Transcript_287681~~R_Transcript_287681.p5 ORF type:complete len:140 (+),score=20.49,gag_pre-integrs|PF13976.2|2.6e-16 R_Transcript_287681:1558-1977(+)
MELVSKVDMTRNHLFTIDIESGEAKCMKTSIKDDSWLWHLRYGHLGFSGLKLLAKENMVNGLPKINPLDQLCEACIKGKQHGQNFEFGKSRRARRPLEIVHSDLAGPFDIPSLGGNRYYLTFIDDFSKKKVGYTFLKKN*

Click here to download the sequence:
Link to NCBI Protein BLAST