Transcript Information: R_Transcript_287691.p1


Annotated TAIR IDAT3G16890.1
Annotated Gene Namepentatricopeptide (PPR) domain protein 40
Annotated Gene Symbol(s)PPR40
Annotation TypeHomolog
Chromosome Positionchr3:5768401-5770380 | Reverse length=659
E-Value1E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21991519222553
Replicate 20.25296747489516
Replicate 30
Condition 2: 8 Hour
Replicate 10.14750521052557
Replicate 20
Replicate 30.32804115579013
Condition 3: 24 Hour
Replicate 10.41490013062116
Replicate 21.0629040429194
Replicate 31.0548291415372


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_287691.p1 GENE.R_Transcript_287691~~R_Transcript_287691.p1 ORF type:internal len:166 (+),score=16.02 R_Transcript_287691:1-495(+)
AAAAAACCCGGTCCAGAAAATCGGATTCTCAGAAAATGTAGAGACTGTAGAGTGGAGCAATATAGTTTGGGGTTCTGGGGCGAACAATCTGCACTAGCTACCGCTCTGCGCTCTCCCTACCGGAGGGACATGAGAGGGTTCTCAACATCAGCATCTCGGGCCTTTCCTGCTTTCAAAATCCTCCCTAATGGCTCCAAACCCACCACCAAACACCCTCTAAAAGTCTCACAAAATACGCACCAGAATGAAGCTCACAAGGTCAAAGGTAAGTCCCCATCAAACCCTCATTTCAAATATTCAAACTTTACTTCCACCTTCAAATACCCTGCAACTCAAAAGATTTCCCAGAATTCAATTGATCATAACTCTCTTTCTCAAATTCTGCTTAGAAAGGACTGGCATTTGTTGCTTAATCATGAGTTAAAAGCTGGTAGGGTTGTTCTGAACCCGCAATCTATAGTGAGTATTTTGCAAAACCAAGAAAACCCATTGCAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_287691.p1 GENE.R_Transcript_287691~~R_Transcript_287691.p1 ORF type:internal len:166 (+),score=16.02 R_Transcript_287691:1-495(+)
KKPGPENRILRKCRDCRVEQYSLGFWGEQSALATALRSPYRRDMRGFSTSASRAFPAFKILPNGSKPTTKHPLKVSQNTHQNEAHKVKGKSPSNPHFKYSNFTSTFKYPATQKISQNSIDHNSLSQILLRKDWHLLLNHELKAGRVVLNPQSIVSILQNQENPLH

Click here to download the sequence:
Link to NCBI Protein BLAST