Transcript Information: R_Transcript_28792.p1


Annotated TAIR IDAT1G67560.1
Annotated Gene NamePLAT/LH2 domain-containing lipoxygenase family protein
Annotated Gene Symbol(s)LOX6
Annotation TypeOrtholog
Chromosome Positionchr1:25319926-25324117 | Forward length=917
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.756981616301
Replicate 29.1485909797672
Replicate 310.662946864785
Condition 2: 8 Hour
Replicate 110.635944043391
Replicate 210.136529657371
Replicate 311.028515789653
Condition 3: 24 Hour
Replicate 111.774031041001
Replicate 29.6995387543134
Replicate 310.395919276185


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_28792.p1 GENE.R_Transcript_28792~~R_Transcript_28792.p1 ORF type:5prime_partial len:739 (+),score=138.68,Lipoxygenase|PF00305.15|0 R_Transcript_28792:3-2219(+)
GAATTCTATTTGGTTGAAGTTGTTGTACATGGATTCAAGGGTGGACCAACGTTCTTCCCTGCGAATTCATGGATCCATTCTCGCGATGATAATCCTGAAAGCAGAATCATATTCAGAAATCATGCGTATTTGCCATCACAAACACCACCTGGCCTTAAAGACTTGCGAAGAGAGGACTTGCTCTGTCTTCGTGGTAATGGGAAGGGGGAGAGGAAACTACATGAAAGGATTTATGATTATGCTCCTTATAATGATTTGGGTAATCCTGATAAAGATGCTGATCTTGCTAGGCCAGTTCTTGCTGGTCCTGAACGACCTTATCCAAGGCGTTGTCGTAGTGGAAGACCACCAATGAAATCTGCTACGGATTGTGAGAGTAGAATTGAGAAGCCTCACCCAGTATATGTTCCCCGTGATGAGGCTTTCGAGGAGATTAAGCAGGCAACATTTGCTGCTGGAAGGCTGAAAGCTGTCTTGCACAATTTGATACCTCTAATTGCTGCTAGTTTGGCGAGTTCAGACATCCCCTTCCGTGGCTTTTCTGATATAGACCAGCTATATATCGATGGTTTTCTTCTGAAAGAGGAAAACCAATCTGAAAACCCTACCAACGTGTTTGTAAACAAGTTTTTGAAGCAAGTTCTCAGCATCAGTGATAGGTTACTGAAGTATGACATTCCTGCTGTTATCAAAAGAGACAGATTTTCGTGGTTGCGGGATAGTGAGTTTGCACGACAGGCTTTAGCAGGAGTCAACCCTGTGAACATCGAACTTCTAAAGGAACTCCCAATTATGAGCAAACTCGATCCTGCTATCTATGGCCCCCCTGAGTCTGCAATCACGAAAGAAGTACTTGAGCAAGAATTGTTCGGAATGAGTGTTGATGAGGCTCTCAGAAGCAAGAGATTGTTTATAATTGATTACCATGATCTTCTCCTTCCTTTTGTCAACAAGATCAATGAGTTACCAGGGAGGAAAGCATATGCCTCTAGAACAGTTCTGTTCTATACCAAGTGTGGGACTATGAAGCCTATTGCTATCGAGCTTTCACTTCCTCGTACAGATTCGAGCCCTGCTTTCAAGCGAGTTTATACTCACGGGCATGATGCTACTAGCCATTGGATCTGGAAGCTAGCCAAAGCCCACGTTTGTGCTGTCGATGCTGGTGTGCATCAACTAATTAATCACTGGTTAAGGACTCATGCTTGCATGGAGGCATACATAATTGCTACTCATAGACAACTTAGTCAAGTGCATCCTATTTACAAGCTCCTTCATCCACATATGCGGTATACCCTTGAAATCAATGCACTTGCTAGACAGAGCTTGATCAATGGAGGGGGGATCATCGAGTTTTGCTTTACCCCTGGAAAGTATGCCATGGAGATCAGCTCTGCCGCCTACAAGAGCATGTGGAGATTCGACTTGGAGGGTCTCCCAGCAGATTTAGTTCGAAGGGGAATGGCAGAGGAGGATCCTTCAGCACCAGGTGGAGTAAAACTAGTAATCGAAGACTACCCTTATGCCGCAGATGGGCTTCTCATATGGTCCGCGATCAAGGAATGGGTCGAATCCTATGTTGCACACTTCTATCCTGATTCAGGTGCAATCATCTCAGATGTTGAGCTTCAAGAGTGGTGGAAGGAGATTAAGAACAAAGGTCACCCAGAGAAGAAAGACGAACCCTGGTGGCCGAAACTCAACACTGAGGAGGACTTGGTTGGGATACTGACCACAATGATTTGGATTGCATCAGGTCAGCACGCAGCCATAAATTTCGGGCAGTACCCATTTGGAGGGTATGTTCCTAACCGTCCTACACTTGTGAGGAAATTGATTCCTCAAGAAGATGAACCTGAATACGAGAATTTCCTTCTCAACCCGCAAACTACTTTCCTCTCATCTTTGCCATCTAAACTTCAAGCAACAAAAGTGATGGCCGTTCAAGACACTTTGTCTACTCATTCCCCAGACGAGGAGTACTTAGGCGAGGATAGCCACTTGCACAGTCATTGGATCAATGATCAAGAAATCAAAGATAATTTCAAGAGATTTTCATCTCGTTTGAAGGAAATTGATGAGATTATCAAAAAAAGGAACAGGGATTTTCATCTCAGAAATAGATGCGGAGCTGGTGTCCCTCCTTACGAGTTGCTTCTGACAACTTCCGATCCTGGTGTTACAGGTCGCGGTGTTCCTAATAGCATATCTATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_28792.p1 GENE.R_Transcript_28792~~R_Transcript_28792.p1 ORF type:5prime_partial len:739 (+),score=138.68,Lipoxygenase|PF00305.15|0 R_Transcript_28792:3-2219(+)
EFYLVEVVVHGFKGGPTFFPANSWIHSRDDNPESRIIFRNHAYLPSQTPPGLKDLRREDLLCLRGNGKGERKLHERIYDYAPYNDLGNPDKDADLARPVLAGPERPYPRRCRSGRPPMKSATDCESRIEKPHPVYVPRDEAFEEIKQATFAAGRLKAVLHNLIPLIAASLASSDIPFRGFSDIDQLYIDGFLLKEENQSENPTNVFVNKFLKQVLSISDRLLKYDIPAVIKRDRFSWLRDSEFARQALAGVNPVNIELLKELPIMSKLDPAIYGPPESAITKEVLEQELFGMSVDEALRSKRLFIIDYHDLLLPFVNKINELPGRKAYASRTVLFYTKCGTMKPIAIELSLPRTDSSPAFKRVYTHGHDATSHWIWKLAKAHVCAVDAGVHQLINHWLRTHACMEAYIIATHRQLSQVHPIYKLLHPHMRYTLEINALARQSLINGGGIIEFCFTPGKYAMEISSAAYKSMWRFDLEGLPADLVRRGMAEEDPSAPGGVKLVIEDYPYAADGLLIWSAIKEWVESYVAHFYPDSGAIISDVELQEWWKEIKNKGHPEKKDEPWWPKLNTEEDLVGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLVRKLIPQEDEPEYENFLLNPQTTFLSSLPSKLQATKVMAVQDTLSTHSPDEEYLGEDSHLHSHWINDQEIKDNFKRFSSRLKEIDEIIKKRNRDFHLRNRCGAGVPPYELLLTTSDPGVTGRGVPNSISI*

Click here to download the sequence:
Link to NCBI Protein BLAST