Transcript Information: R_Transcript_287941.p1


Annotated TAIR IDAT1G21700.1
Annotated Gene NameSWITCH/sucrose nonfermenting 3C
Annotated Gene Symbol(s)ATSWI3C, CHB4, SWI3C
Annotation TypeHomolog
Chromosome Positionchr1:7620156-7623978 | Reverse length=807
E-Value6E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8861142677788
Replicate 21.6932500335724
Replicate 31.9951029519229
Condition 2: 8 Hour
Replicate 13.4754130892864
Replicate 23.1738025839102
Replicate 34.8013937770056
Condition 3: 24 Hour
Replicate 15.0359061015609
Replicate 23.8418838067457
Replicate 35.5778344202093


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_287941.p1 GENE.R_Transcript_287941~~R_Transcript_287941.p1 ORF type:internal len:310 (-),score=38.66,SWIRM|PF04433.13|7.3e-13 R_Transcript_287941:2-928(-)
CCCACACAGACCCCACAATTCCCCCATTTTCTCTCTCCTCTTTCCCTCCTAATTTCTCGTTCCAATGCCTTCTTCTCCCTCAGGTACGTTAACCCTCCGTTTCTCTACTCTAAATCCAAATTCCTTCTTTTTTTTAACCCTAATTTCTCTCTTTTTTCTTCTACAGATGCTCGCCCTAAATGGCGGAGAACCCGCGGTCCGAAGACCACCTCGAAACGGCACCGTCCCGAGGACGACGACGACAACAACAACAACGACGACGATGACGAAAACGACGTCGCTCCAGCTGTCGAACCTGACGAAGATGAAGACCTCCACCCTACTACCACTCCTCCAAACCCTAAAACCCCTTTAAACAACAATCGGAGCGAAACCGAGGTCCTTTCCGGTGGGGCGGTTAGGGTTTCGGATTTCCCGGTGGCATTCAAGCGCGCCGTCAACCGGCCCCACTCCTCCGTCCTCGCAATTGTCGCTGCCGAGAAGGGTCAGGGACAGAGTGGTAATTGTAGTGGTAGTGGTGGTGGTGGTGTGGTTTTGGAGAATTTATCGTACGGACAGCTACAGGCATTGTCGGCTGTGCCCTCGGATAATCCGGCATTAGGGTCGGGGTCCGGGGATCAGGAGGGGCCGGTTGTGATTACTCCCCCTCCGATTATGGAAGGGAAGGGTGTTGTTAAGAGGTTTTGGGATCGGGTCCATGTTCTTCCTCTTCATGCAGATTGGTTTCAGCCGACCACAGTGCACAGACTGGAGAGACAAGTGGTGCCACATTTCTTTTCTGGGAAGTCAGCTGAACACACACCGGAAAAATACATGGACTGTAGGAATATAATTGTTGCCAAATACATGGAAAGCCCAGAGAAGAGGTTGTGGCTTGGGGATTGCCAAGAATTGGCTTTTGGGGTTGACAAAGAAGATCTCAGTCGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_287941.p1 GENE.R_Transcript_287941~~R_Transcript_287941.p1 ORF type:internal len:310 (-),score=38.66,SWIRM|PF04433.13|7.3e-13 R_Transcript_287941:2-928(-)
PTQTPQFPHFLSPLSLLISRSNAFFSLRYVNPPFLYSKSKFLLFFNPNFSLFSSTDARPKWRRTRGPKTTSKRHRPEDDDDNNNNDDDDENDVAPAVEPDEDEDLHPTTTPPNPKTPLNNNRSETEVLSGGAVRVSDFPVAFKRAVNRPHSSVLAIVAAEKGQGQSGNCSGSGGGGVVLENLSYGQLQALSAVPSDNPALGSGSGDQEGPVVITPPPIMEGKGVVKRFWDRVHVLPLHADWFQPTTVHRLERQVVPHFFSGKSAEHTPEKYMDCRNIIVAKYMESPEKRLWLGDCQELAFGVDKEDLSR

Click here to download the sequence:
Link to NCBI Protein BLAST