Transcript Information: R_Transcript_28795.p1


Annotated TAIR IDAT1G67560.1
Annotated Gene NamePLAT/LH2 domain-containing lipoxygenase family protein
Annotated Gene Symbol(s)LOX6
Annotation TypeHomolog
Chromosome Positionchr1:25319926-25324117 | Forward length=917
E-Value2E-123
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5749109298272
Replicate 21.3961734292168
Replicate 32.6949103054297
Condition 2: 8 Hour
Replicate 12.8806899937935
Replicate 23.4313373669339
Replicate 34.3638143179447
Condition 3: 24 Hour
Replicate 14.1100933655736
Replicate 21.7486266639588
Replicate 33.358727061928


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_28795.p1 GENE.R_Transcript_28795~~R_Transcript_28795.p1 ORF type:5prime_partial len:391 (+),score=79.27,Lipoxygenase|PF00305.15|1.5e-116 R_Transcript_28795:3-1175(+)
GAATTCTATTTGGTTGAAGTTGTTGTACATGGATTCAAGGGTGGACCAACGTTCTTCCCTGCGAATTCATGGATCCATTCTCGCGATGATAATCCTGAAAGCAGAATCATATTCAGAAATCATGCGTATTTGCCATCACAAACACCACCTGGCCTTAAAGACTTGCGAAGAGAGGACTTGCTCTGTCTTCGTGGTAATGGGAAGGGGGAGAGGAAACTACATGAAAGGATTTATGATTATGCTCCTTATAATGATTTGGGTAATCCTGATAAAGATGCTGATCTTGCTAGGCCAGTTCTTGCTGGTCCTGAACGACCTTATCCAAGGCGTTGTCGTAGTGGAAGACCACCAATGAAATCTGCTACGGATTGTGAGAGTAGAATTGAGAAGCCTCACCCAGTATATGTTCCCCGTGATGAGGCTTTCGAGGAGATTAAGCAGGCAACATTTGCTGCTGGAAGGCTGAAAGCTGTCTTGCACAATTTGATACCTCTAATTGCTGCTAGTTTGGCGAGTTCAGACATCCCCTTCCGTGGCTTTTCTGATATAGACCAGCTATATATCGATGGTTTTCTTCTGAAAGAGGAAAACCAATCTGAAAACCCTACCAACGTGTTTGTAAACAAGTTTTTGAAGCAAGTTCTCAGCATCAGTGATAGGTTACTGAAGTATGACATTCCTGCTGTTATCAAAAGAGACAGATTTTCGTGGTTGCGGGATAGTGAGTTTGCACGACAGGCTTTAGCAGGAGTCAACCCTGTGAACATCGAACTTCTAAAGGAACTCCCAATTATGAGCAAACTCGATCCTGCTATCTATGGCCCCCCTGAGTCTGCAATCACGAAAGAAGTACTTGAGCAAGAATTGTTCGGAATGAGTGTTGATGAGGCTCTCAGAAGCAAGAGATTGTTTATAATTGATTACCATGATCTTCTCCTTCCTTTTGTCAACAAGATCAATGAGTTACCAGGGAGGAAAGCATATGCCTCTAGAACAGTTCTGTTCTATACCAAGTGTGGGACTATGAAGCCTATTGCTATCGAGCTTTCACTTCCTCGTAAAGTTTCGAGCCCTACTTTCAAGCGAGTTTATACTCACAGGCAGCCATTGGATCTGGAACATAGCCAAAGCTTACATTTGTGCTGTCGATGCTGGTGTGCATCAACTAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_28795.p1 GENE.R_Transcript_28795~~R_Transcript_28795.p1 ORF type:5prime_partial len:391 (+),score=79.27,Lipoxygenase|PF00305.15|1.5e-116 R_Transcript_28795:3-1175(+)
EFYLVEVVVHGFKGGPTFFPANSWIHSRDDNPESRIIFRNHAYLPSQTPPGLKDLRREDLLCLRGNGKGERKLHERIYDYAPYNDLGNPDKDADLARPVLAGPERPYPRRCRSGRPPMKSATDCESRIEKPHPVYVPRDEAFEEIKQATFAAGRLKAVLHNLIPLIAASLASSDIPFRGFSDIDQLYIDGFLLKEENQSENPTNVFVNKFLKQVLSISDRLLKYDIPAVIKRDRFSWLRDSEFARQALAGVNPVNIELLKELPIMSKLDPAIYGPPESAITKEVLEQELFGMSVDEALRSKRLFIIDYHDLLLPFVNKINELPGRKAYASRTVLFYTKCGTMKPIAIELSLPRKVSSPTFKRVYTHRQPLDLEHSQSLHLCCRCWCASTN*

Click here to download the sequence:
Link to NCBI Protein BLAST