Transcript Information: R_Transcript_288094.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value5E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.13131626586129
Replicate 20.30210504196112
Replicate 30.65918669341446
Condition 2: 8 Hour
Replicate 10.88078650889371
Replicate 20.80434826766855
Replicate 31.3058712676537
Condition 3: 24 Hour
Replicate 10.82582040387425
Replicate 20.7933546363517
Replicate 30.94479300806751


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_288094.p1 GENE.R_Transcript_288094~~R_Transcript_288094.p1 ORF type:complete len:139 (-),score=13.53,zf-RVT|PF13966.2|4.4e-07,zf-RVT|PF13966.2|1.6e+03 R_Transcript_288094:18-434(-)
ATGATATGCGGCAACATCGGCGGCCTCAGTGGTGCCTTTCACCTTTCACCTGATAAGTGTTTCATGTGTCACAAAAGTGGGGAGACAGCCTCTCATCTCTTTCTCCATTGTCCTATTGCGCGGTTTGTGTGGGCTTTGCTCTTTGGTGTGCGTGGGGAAGCCCTGGTCTGGCCGTCCATAGTTTTGGAGTTCCTCCAGGTTTACTTTTGGGGGTTTAGTAGGGATAAGGACTTGGGTGTGTTATGGCGGAACGCGATTTTTGCTACTTTGTGGTGTATTTGGTTGGAGCGCAATGCTAGGGTGTTTCAGCAGTTTGCTCTCCCTACTTCCCTTATGTGGGAGCGTATCACCTTCTTAGCTTCCTTGTGGAGTAAGGCTGGTGGGGCTTTCCGTAGTTGTTCTATTTCTGATGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_288094.p1 GENE.R_Transcript_288094~~R_Transcript_288094.p1 ORF type:complete len:139 (-),score=13.53,zf-RVT|PF13966.2|4.4e-07,zf-RVT|PF13966.2|1.6e+03 R_Transcript_288094:18-434(-)
MICGNIGGLSGAFHLSPDKCFMCHKSGETASHLFLHCPIARFVWALLFGVRGEALVWPSIVLEFLQVYFWGFSRDKDLGVLWRNAIFATLWCIWLERNARVFQQFALPTSLMWERITFLASLWSKAGGAFRSCSISDV*

Click here to download the sequence:
Link to NCBI Protein BLAST