Transcript Information: R_Transcript_28856.p1


Annotated TAIR IDAT5G28780.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10812907-10814173 | Reverse length=337
E-Value3E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.418725500702
Replicate 210.126534271577
Replicate 310.237081846068
Condition 2: 8 Hour
Replicate 16.3923275747233
Replicate 28.5090081342565
Replicate 36.4253488921724
Condition 3: 24 Hour
Replicate 110.7678210891
Replicate 28.1975298531349
Replicate 39.8785215843519


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_28856.p1 GENE.R_Transcript_28856~~R_Transcript_28856.p1 ORF type:complete len:226 (+),score=24.94,PIF1|PF05970.10|2.1e-27 R_Transcript_28856:919-1596(+)
ATGAGGCCAGAAATCCAAAATGCAAGATCAACAAAAAGTAAAGAAAAGAAAAAGAAAGACAAACCCTTTGCCAACATAGAGGAAGAAACCAAGCAAAGGAAGAGCATGCCAACTTTCTTTGTGAATTTGGTGTACCCTGATCTTCGTCAGCTTGCAGCTCATCCACATGCATTTAGCTCACGTGCAACACTAACTCCAACAAATGATGAGGTTGAATGCATTAATAAATTAGTGATCGACAATTTCCCGGGTGAGGCATCCACTTACAAAAGCTATGACAACACTGTAGACGATGATTGTAATGCTCACCCAGTGGAGTTTTTGAATACACTATGCCCAGGGGGAATGAGTCCACACAACTTGACGTTAAAATTGAACTGCCCAATCATGTTACTAAGCAATCTCAATCCATCCGTTGGACTTTGCAATGGAACTAGGCTCATAGTCAGGGGTTTTAAGCCCAATCTGGTTTTGTGTGAGATAACAACAGGATATCATGCTGGTGACTATGTCTTCATTCCACGAATTAGTTTAGCACCATCAAGCTCCATCACATATCCATATAGATTTGAAAGACGGCAGTTTCCAATCAAACTTTGTTTCGCAATGACAATCAATAAGTCTCAGGGCCAAAATTTTAGTATTATTACAATTACAAAAATTCTTTTCGATTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_28856.p1 GENE.R_Transcript_28856~~R_Transcript_28856.p1 ORF type:complete len:226 (+),score=24.94,PIF1|PF05970.10|2.1e-27 R_Transcript_28856:919-1596(+)
MRPEIQNARSTKSKEKKKKDKPFANIEEETKQRKSMPTFFVNLVYPDLRQLAAHPHAFSSRATLTPTNDEVECINKLVIDNFPGEASTYKSYDNTVDDDCNAHPVEFLNTLCPGGMSPHNLTLKLNCPIMLLSNLNPSVGLCNGTRLIVRGFKPNLVLCEITTGYHAGDYVFIPRISLAPSSSITYPYRFERRQFPIKLCFAMTINKSQGQNFSIITITKILFDF*

Click here to download the sequence:
Link to NCBI Protein BLAST