Transcript Information: R_Transcript_288930.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value6E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0860526805393
Replicate 22.0996300416298
Replicate 32.6179128681317
Condition 2: 8 Hour
Replicate 12.7983845653994
Replicate 22.2360881841186
Replicate 33.2413590393548
Condition 3: 24 Hour
Replicate 12.4597650601111
Replicate 21.8904507620495
Replicate 32.0324297209262


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_288930.p1 GENE.R_Transcript_288930~~R_Transcript_288930.p1 ORF type:internal len:140 (+),score=9.42,zf-RVT|PF13966.2|1.4e-17,zf-RVT|PF13966.2|4.3e+03 R_Transcript_288930:1-417(+)
CTTGGTAATGCCAGGGGGTCTACTTTCCCGCTAGCGGGGCTGATTTGGAAGGCGAAGGCACCTCTCAAGGTGCGGGGCTTTACCTGGACACTTGCTCTGAATAGGATCAATACTAATGACATGCTGCAACGAAGGCGACCAGGGTGGTGCCTCTCTCCGGATGTCTGTATGATGTGTGGGGTTAGTGCTGAGCCAGCCCCTCATTTATTTTTGCATTGCAAGCTGGCAAGGGCGCTTTGGGGTAAGCTTTTTGATGTGAAAGGGGAACTGACGGTGTGTCCTGAGACGATCCTTGAATTCTTACAGATTCGTCATGTGGGCTTCGAGACGGATAAAGAGATGCGGATCCTTTGGAGAAACGCTATGCTAGCAGTGTTGTGGTGCATATGGTTGGAGCGTAATGCTAGGAGATTCTCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_288930.p1 GENE.R_Transcript_288930~~R_Transcript_288930.p1 ORF type:internal len:140 (+),score=9.42,zf-RVT|PF13966.2|1.4e-17,zf-RVT|PF13966.2|4.3e+03 R_Transcript_288930:1-417(+)
LGNARGSTFPLAGLIWKAKAPLKVRGFTWTLALNRINTNDMLQRRRPGWCLSPDVCMMCGVSAEPAPHLFLHCKLARALWGKLFDVKGELTVCPETILEFLQIRHVGFETDKEMRILWRNAMLAVLWCIWLERNARRFS

Click here to download the sequence:
Link to NCBI Protein BLAST