Transcript Information: R_Transcript_288934.p1


Annotated TAIR IDAT3G11290.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11310.1); Has 720 Blast hits to 435 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 32; Plants - 682; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:3535766-3537295 | Reverse length=460
E-Value4.6E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21991519222553
Replicate 20.25296747489516
Replicate 30.55196958063018
Condition 2: 8 Hour
Replicate 10.29501042105115
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.53145202145969
Replicate 30.52741457076861


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_288934.p1 GENE.R_Transcript_288934~~R_Transcript_288934.p1 ORF type:internal len:83 (+),score=8.70,Myb_DNA-bind_3|PF12776.3|2.6e-15 R_Transcript_288934:1-246(+)
GTTCTTGAAGCATTGAATAAGAAACCGAACTTCAACATTGACAAGAAACAGTTAAAGAACCACTGGGATTTAACTAGACAGAAATGGAAGGCCTGGTGCAAGCTACTAGGCACGAGCATCATGAAATGGGAACCTACTACTCGAAAATTTGGTGCAAGTCAAGAAGATTGGGCTAATTATATAAAGGTATCAGAATTTTCTCACTTAGGCATGTCACACAAACTGCTGATTGCCTCTCATATTTCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_288934.p1 GENE.R_Transcript_288934~~R_Transcript_288934.p1 ORF type:internal len:83 (+),score=8.70,Myb_DNA-bind_3|PF12776.3|2.6e-15 R_Transcript_288934:1-246(+)
VLEALNKKPNFNIDKKQLKNHWDLTRQKWKAWCKLLGTSIMKWEPTTRKFGASQEDWANYIKVSEFSHLGMSHKLLIASHIS

Click here to download the sequence:
Link to NCBI Protein BLAST