Transcript Information: R_Transcript_289333.p1


Annotated TAIR IDAT5G54150.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54148.1); Has 103 Blast hits to 99 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21977461-21978237 | Reverse length=160
E-Value0.0004
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.9856704176894
Replicate 23.3744054240479
Replicate 36.5447821703293
Condition 2: 8 Hour
Replicate 13.935228295093
Replicate 23.9930146144974
Replicate 32.1068833755806
Condition 3: 24 Hour
Replicate 13.8946280118427
Replicate 23.1507512700825
Replicate 32.7359630858622


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_289333.p1 GENE.R_Transcript_289333~~R_Transcript_289333.p1 ORF type:5prime_partial len:112 (-),score=12.68 R_Transcript_289333:331-666(-)
AAAAAGGGTAACCCATACATGAGATCAACAACTTCTCTAAAGAGTAAGGAATGCATAAGAGAGATTGAAAAACTTGAAGTTGGCTTTCTCTTGGATTTTGACCCTTATGAATCTTTTAGTTTCTCTTCTGTTTCCAAGCTTCAAATCAAGATAATGATGCTCCTGGTATCTTGGTTGTGGCTTAATAAGGCCAGGTGGCTTGCAGTTCCGCATTCAAGACATCAGTGGAAAATATGTCCATCTGCAAAGACACCCCATGAGAGCCATTGCAAATTAGTAATTAATTTTTTGCAACCGATCGATTTTCAATTAAGTGATGCTATGATAAATAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_289333.p1 GENE.R_Transcript_289333~~R_Transcript_289333.p1 ORF type:5prime_partial len:112 (-),score=12.68 R_Transcript_289333:331-666(-)
KKGNPYMRSTTSLKSKECIREIEKLEVGFLLDFDPYESFSFSSVSKLQIKIMMLLVSWLWLNKARWLAVPHSRHQWKICPSAKTPHESHCKLVINFLQPIDFQLSDAMINK*

Click here to download the sequence:
Link to NCBI Protein BLAST