Transcript Information: R_Transcript_289392.p1


Annotated TAIR IDAT5G42960.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G45170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17235184-17236478 | Forward length=213
E-Value1E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.16663730489125
Replicate 30.36359900946274
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.1440604017491
Condition 3: 24 Hour
Replicate 10.54661445780248
Replicate 20.1750417372268
Replicate 30.1737119419595


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_289392.p1 GENE.R_Transcript_289392~~R_Transcript_289392.p1 ORF type:5prime_partial len:126 (+),score=7.52 R_Transcript_289392:1-378(+)
GACGTTATAGTCGATGATGAAAGAACCGGGTTTCTCGAGAGAAAGAGAGAGGCCAGTCAAGCTGGGGCCCGCAGCAAAGGTGGCTTTAGTAACGGAGGCTCTAAGTCTTACATCGCCGCCGTTTACGGTGAGTGTTCCGGCGGCGTATGCCCCCTTCATCGAAGCCTTCAGCATTTTTTTTTTATTTTTGTTATTGAGAGAATGGGGATGAAGGAAGGAGGGGATAGGATACTTCACTCCTTCTGCAGCCATGGAAGCGGCCTTCTTGGCAAGAGCTCAGGCTCCGTATTGAGAAAGTTTAGGCCCCGTATAATACTGCCTCAAAGTTCTGGCCCCCGTAAAGTGAGGTTGTATTATCAGATTTTTGATTTTTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_289392.p1 GENE.R_Transcript_289392~~R_Transcript_289392.p1 ORF type:5prime_partial len:126 (+),score=7.52 R_Transcript_289392:1-378(+)
DVIVDDERTGFLERKREASQAGARSKGGFSNGGSKSYIAAVYGECSGGVCPLHRSLQHFFFIFVIERMGMKEGGDRILHSFCSHGSGLLGKSSGSVLRKFRPRIILPQSSGPRKVRLYYQIFDFF*

Click here to download the sequence:
Link to NCBI Protein BLAST