Transcript Information: R_Transcript_2903.p1


Annotated TAIR IDAT3G28730.1
Annotated Gene Namehigh mobility group
Annotated Gene Symbol(s)ATHMG, SSRP1, NFD, HMG
Annotation TypeOrtholog
Chromosome Positionchr3:10784954-10788498 | Forward length=646
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 151.37348052325
Replicate 241.927697276441
Replicate 346.309138756982
Condition 2: 8 Hour
Replicate 152.037193666866
Replicate 259.064524059639
Replicate 371.905066491579
Condition 3: 24 Hour
Replicate 169.831475462321
Replicate 260.3366433328
Replicate 367.726715275376


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_2903.p1 GENE.R_Transcript_2903~~R_Transcript_2903.p1 ORF type:complete len:647 (+),score=183.30,SSrecog|PF03531.10|9.4e-80,Rtt106|PF08512.8|1.6e-22,HMG_box|PF00505.15|1.3e-20,HMG_box_2|PF09011.6|2.6e-17 R_Transcript_2903:86-2026(+)
ATGGCGGACGGCCATCTCTTCAGTAGCATCTCACTCGTTGGTCGTACTGGCACTAATCAAGGGCAAATGAGAGTTCATGCGGGGGGTGTTTTGTGGAAAAAGCAAGGTCAGCAAGGTGGTGGAAAACTTGTTGAACTTGACAAGAGTAATATCTCTGGAATATATTGGATGAAGATTCCTAGGTCTAATAATCAGCTCATTGTTCTCAGTAAAGATGGCTTGTACTACAACTTCACCGGTTTTCGTGATCAGGATGTTGCAAGTTTGACCAGCTTTTTCCGAAACAGTTATGGAATCAGTCCGGAGGAGAAACAGCTTTCTGTTAGTGGGCATAACTGGGGAGAAGTCGACTTCAATGGGAACATGCTGACTTTTCTTGTAGGATCAAAACAAGCCTTTCAGCTATCATTAGCTGATGTCTCACAGACCCAGATGCAAGGGAAAAATGATGTCCTGTTGGAGTTTCACATGGATGATACAACAGGGGCCAATGAGAAAGATTCACTTATGGAAATAAGTTTTCACATACCAAATTCTAACACCCAATTTGTTGGTGATGAAAATCGTCCTTCTGCTCAAGTCTTCCACGACAAGATCATGTCTGTGGCTGATGTAGATGCAGAAGAGGCTGTTGTGACATTTGATGGTATTGCAATCCTTACTCCCAGGGGTCGGTACAGTGTTGAGCTACATCTTTCGTTCTTGCGGCTCCAAGGCCAGGCTAATGATTTTAAAATTCAGTATAGCAGTGTTGTTCGCCTCTTCTGTCTTCCAAAGTCGAACCAACCACACACTTTTGTTATTATAACACTTGATCCGCCAATCCGAAAAGGGCAAACTTTGTACCCACATATTGTGATGCAGTTTGAGACAGACTATGTGGTTGAAAGCACACTCTCCATAAGTGAGGAGCTTTTGAATACCAAGTACAAGGATAAGTTGGAATCATCTTACAAGGGGCTCATTCACGATGTGTTCACAAACATATTGCGAGCCTTATCTAGTGCCAAGGTTACAAGGCCTGGAAAATTCCGCAGCAACCAAGATGGCTATGCTGTGAAGTCATCACTGAAAGCTGAAGATGGTATTCTTTACCCACTAGAAAAGAGCTTTTTCTTCTTACCCAAGCCTCCAACTCTTATTCTTCATGAAGAGATTGATTATGTGGAATTTCAAAGGCATGTTGCTGGAGGATCCAATATGCATTACTTTGACCTTCTTATAAGACTGAAGACAGAGCAAGAACATCTGTTCAGGAACATTCAGAGGAATGAATATCACAATTTGTTTGACTTCATCAGCTCAAAGGGCTTGAAGATCATGAATTTGGGTGATGGTCATGGTCAAGCTACAGGAGGTGGGGTCTCTGCTGTTCTCCGTAGTGGTGATGATGACGCCGTTGATCCCCATCTTGAGAGAATCAGGAATGCAGCTGGAGATGAGAGTGATGAAGAGGATGAAGATTTTGTTGCGGACATGGATGATGGAGGTTCTCCAACAGATGAGTCTGATGATGAGGGATCTGATGCAAGTGGTAGTGATGATGAGAAAGAGAGGCCAGCTAAGAAAGAGAAGAAAGATCAAGTATCATCATCGAAGGCTTCAGGCAAGAAGAAGTCTAAAGAGGGAGGAGATGAAGACGGGTCAAAGAAGAGAAAGCAAAAGAAGAAAAAGGATCCAAATGCACCAAAAAGGGCATTGACTGGTTTTCTTTACTTCTCACAGGCAGAGCGGGATAATGTAAAGAGGGAGAACCCAGGCATTCCATTCCTAGATGTGGGTAGGGTTCTGGGAGAGAAATGGAGGAGCATGTCAGCTGAAGAGAAAGAACCTTATGAAGCAATGGCTCGTGCTGACAAGAAACGTTACAATGATGAAATTGGCGACTACAAGAACCCACAGGCTGGGAATGCAGATTCAGCTGACGAATCTGACAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_2903.p1 GENE.R_Transcript_2903~~R_Transcript_2903.p1 ORF type:complete len:647 (+),score=183.30,SSrecog|PF03531.10|9.4e-80,Rtt106|PF08512.8|1.6e-22,HMG_box|PF00505.15|1.3e-20,HMG_box_2|PF09011.6|2.6e-17 R_Transcript_2903:86-2026(+)
MADGHLFSSISLVGRTGTNQGQMRVHAGGVLWKKQGQQGGGKLVELDKSNISGIYWMKIPRSNNQLIVLSKDGLYYNFTGFRDQDVASLTSFFRNSYGISPEEKQLSVSGHNWGEVDFNGNMLTFLVGSKQAFQLSLADVSQTQMQGKNDVLLEFHMDDTTGANEKDSLMEISFHIPNSNTQFVGDENRPSAQVFHDKIMSVADVDAEEAVVTFDGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFCLPKSNQPHTFVIITLDPPIRKGQTLYPHIVMQFETDYVVESTLSISEELLNTKYKDKLESSYKGLIHDVFTNILRALSSAKVTRPGKFRSNQDGYAVKSSLKAEDGILYPLEKSFFFLPKPPTLILHEEIDYVEFQRHVAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISSKGLKIMNLGDGHGQATGGGVSAVLRSGDDDAVDPHLERIRNAAGDESDEEDEDFVADMDDGGSPTDESDDEGSDASGSDDEKERPAKKEKKDQVSSSKASGKKKSKEGGDEDGSKKRKQKKKKDPNAPKRALTGFLYFSQAERDNVKRENPGIPFLDVGRVLGEKWRSMSAEEKEPYEAMARADKKRYNDEIGDYKNPQAGNADSADESDN*

Click here to download the sequence:
Link to NCBI Protein BLAST