Transcript Information: R_Transcript_2904.p2


Annotated TAIR IDAT3G28730.1
Annotated Gene Namehigh mobility group
Annotated Gene Symbol(s)ATHMG, SSRP1, NFD, HMG
Annotation TypeHomolog
Chromosome Positionchr3:10784954-10788498 | Forward length=646
E-Value7E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.2765182184352
Replicate 21.8442696311613
Replicate 37.5839874473748
Condition 2: 8 Hour
Replicate 14.467015902538
Replicate 25.8923945392313
Replicate 312.755185841353
Condition 3: 24 Hour
Replicate 111.013542656534
Replicate 27.4511009765464
Replicate 311.387522033048


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_2904.p2 GENE.R_Transcript_2904~~R_Transcript_2904.p2 ORF type:5prime_partial len:148 (+),score=29.97,SSrecog|PF03531.10|7e+02,SSrecog|PF03531.10|5.1e-09 R_Transcript_2904:1-444(+)
GGGGAGCTTCACTTCATTCTATCTTTTCTCTCTCTCTTTCTCCCTCTGGAATTCTCTCTACAATCAGCAGCTATGGCGGACGGCCATCTCTTCAGTAGCATCTCACTCGTTGGTCGTACTGGCACTAATCAAGGGCAAATGAGAGTTCATGCGGGGGGTGTTTTGTGGAAAAAGCAAGGTCAGCAAGGTGGTGGAAAACTTGTTGAACTTGACAAGAGTAATATCTCTGGAATATATTGGATGAAGATTCCTAGGTCTAATAATCAGCTCATTGTTCTCAGTAAAGATGGCTTGTACTACAACTTCACCGGTTTTCGTGATCAGGATGTTGCAAGTTTGACCAGCTTTTTCCGAAACAGTTATGGAATCAGTCCGGAGGAGAAACAGCTTTCTGTTAGTGGGCATAACTGGGGAGAAGTCGACTTCAATGGTTTGTTTGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_2904.p2 GENE.R_Transcript_2904~~R_Transcript_2904.p2 ORF type:5prime_partial len:148 (+),score=29.97,SSrecog|PF03531.10|7e+02,SSrecog|PF03531.10|5.1e-09 R_Transcript_2904:1-444(+)
GELHFILSFLSLFLPLEFSLQSAAMADGHLFSSISLVGRTGTNQGQMRVHAGGVLWKKQGQQGGGKLVELDKSNISGIYWMKIPRSNNQLIVLSKDGLYYNFTGFRDQDVASLTSFFRNSYGISPEEKQLSVSGHNWGEVDFNGLFV*

Click here to download the sequence:
Link to NCBI Protein BLAST