Transcript Information: R_Transcript_290621.p1


Annotated TAIR IDAT5G03670.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36420.1); Has 700 Blast hits to 624 proteins in 104 species: Archae - 0; Bacteria - 18; Metazoa - 333; Fungi - 60; Plants - 73; Viruses - 24; Other Eukaryotes - 192 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:947311-949898 | Forward length=516
E-Value2E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.6171514707658
Replicate 215.352133637723
Replicate 314.039613365384
Condition 2: 8 Hour
Replicate 111.05813255682
Replicate 211.300660715438
Replicate 39.7589304410683
Condition 3: 24 Hour
Replicate 113.330339680602
Replicate 216.600732498284
Replicate 312.473638154899


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_290621.p1 GENE.R_Transcript_290621~~R_Transcript_290621.p1 ORF type:5prime_partial len:93 (-),score=25.56,DUF4378|PF14309.2|2.5e-07 R_Transcript_290621:235-513(-)
ATTAAAAGGGTGTGCAAGAGATTAGAGTCATGGAAGGAAGTTGAAGATAATGCCTTAGACGAAAATGATGATGAATTACTCATTAAAAGGGTGTGCAAGAGATTAGAGTCATGGAAGGAAGTTGAAGCAAACACAATCGACATGATGGTGGAAATGGATCTGAGAAGGGAAAGTGGTGAGTGGAAGAAACCACAAGATAAAATTTGTGAGGCTGCAAATGATATCGAATTTGCCATTTTTGCAGCTTTGGTTGAGGAATTAGTGCAAGATCTATGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_290621.p1 GENE.R_Transcript_290621~~R_Transcript_290621.p1 ORF type:5prime_partial len:93 (-),score=25.56,DUF4378|PF14309.2|2.5e-07 R_Transcript_290621:235-513(-)
IKRVCKRLESWKEVEDNALDENDDELLIKRVCKRLESWKEVEANTIDMMVEMDLRRESGEWKKPQDKICEAANDIEFAIFAALVEELVQDLC*

Click here to download the sequence:
Link to NCBI Protein BLAST