Transcript Information: R_Transcript_29088.p1


Annotated TAIR IDAT3G57780.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 3163 Blast hits to 2460 proteins in 357 species: Archae - 16; Bacteria - 291; Metazoa - 841; Fungi - 335; Plants - 248; Viruses - 72; Other Eukaryotes - 1360 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:21399766-21402329 | Reverse length=671
E-Value1E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.6447017981356
Replicate 22.4273179672021
Replicate 34.8991288500442
Condition 2: 8 Hour
Replicate 13.5384197900643
Replicate 23.1020876542685
Replicate 38.1839631698855
Condition 3: 24 Hour
Replicate 12.8531378924603
Replicate 23.7608678455031
Replicate 36.0096298995816


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_29088.p1 GENE.R_Transcript_29088~~R_Transcript_29088.p1 ORF type:3prime_partial len:346 (+),score=97.64 R_Transcript_29088:710-1744(+)
ATGCCTGAAGGGCAAGAAGAAAGGTCAGGGGTTTCAAACCAAGTTCCTAACGGCCATGAAAATCCTGTTCAAGAAAAGGAGGATGGTTTAGTAGATGATCATTCTAGTGAATTTGGTACCGATACACAGAAGGTCAAGGGAGAAGACTCTGATTTCGAATCTGCTAAAGATTCGTCATCATCACAGGATGATTCTCGAACAGCTGATGAGGAGACGCTTGAAAATCGTCCTAAGAAGAGTCCTAAGAAAGCTTCTTCTGAAAAGAAAAAATCTGATTCGAAACCAAAGAAGGAGGTCAAATCTCATAATCCAAAATTGGTTGCTAAAAATCCATCTGACAATAATAGTAAGTGCATGGATATGAAAGTCCATCCCTCGTCTACTCCCTCTGAGGGAACTGAGGATGAACCGATTGAGGGACCGAGCCAAGAAATGTTTGATGCGGCTTCAAATGGTGCTAAAAGCACTGAGAGTGACGCAGAAACTGTTCAGACTGAAGACAATGATGCACAACAGGAAAAAGCAGCCTTGAACGAGAAGGTTGAGATGATGGAAAGCAAGATTGAGAAACTCGAGGAGGAACTTAGGGAAGTTGCTGCTCTCGAAATCTCACTCTATTCTGTGATACCTGAACATGGGAGCTCTGCCCACAAGGTGCACACTCCTGCTCGTCGTCTTTCTAGATTGTACATACATGCCTGCAAGCATTGGAAACCAAGGAAGAGGGCAACAATTGCTCAAAACACTGTTTCAGGGCTTATTTTGGTTGCCAGAACTTGTGGAAATGATGTTGCAAGGTTAACCTTTTGGCTGTCTAACACTGTTGTACTGAGGGGAATTATCTCACAAGCATTTGGCATCTCAAGCCAGCCGAAAAATGTTGCACCCTCGAAATTGAAAAGTGGAAAACAAGTGAATAAAACCCCTCAATTATTTGAAGATTGGCAGGAGAAAAGTACCTTCACTGCTGCTTTGGAAAAAATCGAGTCCTGGATCTTTTCTCGGGTTGTTGAATCAGTGTGGTGGCAGGCATTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_29088.p1 GENE.R_Transcript_29088~~R_Transcript_29088.p1 ORF type:3prime_partial len:346 (+),score=97.64 R_Transcript_29088:710-1744(+)
MPEGQEERSGVSNQVPNGHENPVQEKEDGLVDDHSSEFGTDTQKVKGEDSDFESAKDSSSSQDDSRTADEETLENRPKKSPKKASSEKKKSDSKPKKEVKSHNPKLVAKNPSDNNSKCMDMKVHPSSTPSEGTEDEPIEGPSQEMFDAASNGAKSTESDAETVQTEDNDAQQEKAALNEKVEMMESKIEKLEEELREVAALEISLYSVIPEHGSSAHKVHTPARRLSRLYIHACKHWKPRKRATIAQNTVSGLILVARTCGNDVARLTFWLSNTVVLRGIISQAFGISSQPKNVAPSKLKSGKQVNKTPQLFEDWQEKSTFTAALEKIESWIFSRVVESVWWQAL

Click here to download the sequence:
Link to NCBI Protein BLAST