Transcript Information: R_Transcript_29089.p1


Annotated TAIR IDAT3G05545.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:1609436-1612133 | Forward length=425
E-Value8.9E-119
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 151.372188903883
Replicate 239.918267538456
Replicate 346.144656940683
Condition 2: 8 Hour
Replicate 146.080627768189
Replicate 251.025915912296
Replicate 362.371558420896
Condition 3: 24 Hour
Replicate 150.894416022862
Replicate 240.124627620207
Replicate 351.950335220708


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_29089.p1 GENE.R_Transcript_29089~~R_Transcript_29089.p1 ORF type:complete len:415 (+),score=72.11,zf-RING_2|PF13639.2|3.6e-09,zf-RING_11|PF17123.1|3.7e-08,zf-C3HC4|PF00097.21|2.5e-06 R_Transcript_29089:376-1620(+)
ATGGGGTTTGATGATTCTGACTTAGTTGATGACGGTGATGGTGGAGGCAAATCGTCCAACGTCTCGTGCTCGATTTGTCTTGAGCCAGTCACCGACAGTGGTGAAAGATCCTGGGCTAAGCTCCAATGCGGTCATGAATTTCATCTTGATTGTATTGGTTCTGCATTTAATATCAAAGGCGCAATGCAATGCCCTAATTGTCGAAAGGTTGAAAAAGGTCAGTGGCTTTTTGCCACTGGTTGCCGTTCAATGGCGGATATTCATTTTGAGGACTGGCCGCATGATGAGGATCTTTATGATCTAAGCTACTCTGAGATGTCTTTTGGAGTTCAGTGGTGTCCAATTACAGCATTTCACCGACTTCCATCCTCTTTTGATGAGGGCGAGTTCCCGTCTACTGCATATCATGATCTTGTGGGACAACATGCTGTCTTCACTGAACATACAGCTGTTTCATCATCTACCCATCCATGTCCTTATGTTGCATATTATGGACCAATTCATTCCTCATCCTCAAACGCTGTTGGAAGTGTGTCAGATGGCTCCAATTTTAGCAGTCATTGGGGTGGTCCATCTGGATCAAGTGAAATGCCAACTTCTTATTCTTTTGCTGCCCTGGATCCCCACTACCCGAGTTGGGATCATCATTCCATGACTTTCTCAGCATCTGGCAGCCGGTTAGGTGGTTCTGATCAACCATCCATTCCATCTGTGACTCAAAGATCATCTCGAGCCAATTCTGATTTGCCAAGATCAGGATCATTTGTCCATCCGTTTATTGTAGGTCACAGTTCTGGTGCTAGGGTTGGAGGCTCAGTCACCTCCTCTATGATTCCACCATACCCAGGCAGTGCTGCTCGGAATCGTGATCGTGTACAGGCTCTCCAGGCATATTTTCAACCACCAAGCACTTCGCCACCAATGCGTACCCCTATGATGCCTGGTACGAGAAGATCCAATAGTCATCGGGGCCTGTCCCAGGTGGGACCGTTGCCCTCATCATCTGATCAGACAGGTGGCTTCTACGTCTTTCCATCAGGGACATCCGGTCAGAACTTCCCCGAAGCAGAGAATCCAATGAGTAGCAGATTTCATGCATGGGAAAGAGACCATCTGTCTAACTTCCCGTTAACAACGGTTGATAGAGAATCCAGTTGGGGTGGGTTTCACCAAGCTGCTGGTGGATCCAGCAGCTTCCGCCAACGGCATGGATCTGAGAGGACACCATCACAAAGTCGGTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_29089.p1 GENE.R_Transcript_29089~~R_Transcript_29089.p1 ORF type:complete len:415 (+),score=72.11,zf-RING_2|PF13639.2|3.6e-09,zf-RING_11|PF17123.1|3.7e-08,zf-C3HC4|PF00097.21|2.5e-06 R_Transcript_29089:376-1620(+)
MGFDDSDLVDDGDGGGKSSNVSCSICLEPVTDSGERSWAKLQCGHEFHLDCIGSAFNIKGAMQCPNCRKVEKGQWLFATGCRSMADIHFEDWPHDEDLYDLSYSEMSFGVQWCPITAFHRLPSSFDEGEFPSTAYHDLVGQHAVFTEHTAVSSSTHPCPYVAYYGPIHSSSSNAVGSVSDGSNFSSHWGGPSGSSEMPTSYSFAALDPHYPSWDHHSMTFSASGSRLGGSDQPSIPSVTQRSSRANSDLPRSGSFVHPFIVGHSSGARVGGSVTSSMIPPYPGSAARNRDRVQALQAYFQPPSTSPPMRTPMMPGTRRSNSHRGLSQVGPLPSSSDQTGGFYVFPSGTSGQNFPEAENPMSSRFHAWERDHLSNFPLTTVDRESSWGGFHQAAGGSSSFRQRHGSERTPSQSRS*

Click here to download the sequence:
Link to NCBI Protein BLAST