Transcript Information: R_Transcript_2909.p1


Annotated TAIR IDAT5G57660.1
Annotated Gene NameCONSTANS-like 5
Annotated Gene Symbol(s)ATCOL5, COL5
Annotation TypeHomolog
Chromosome Positionchr5:23355573-23356729 | Forward length=355
E-Value2E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0614143373421
Replicate 20
Replicate 32.1022006021785
Condition 2: 8 Hour
Replicate 10.69738222951015
Replicate 20.35381142153775
Replicate 30
Condition 3: 24 Hour
Replicate 12.7607489704201
Replicate 20.13959024614289
Replicate 30.5541191059974


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_2909.p1 GENE.R_Transcript_2909~~R_Transcript_2909.p1 ORF type:complete len:316 (+),score=3.31,zf-B_box|PF00643.20|0.0023,zf-B_box|PF00643.20|1.9e-06,zf-B_box|PF00643.20|5.6e+03 R_Transcript_2909:128-1075(+)
ATGGTGACACTAGATGAGGAAAACTTCAAGGGCTTGCTAGGCCTAGCGGCCCGGCCATGCGACACGTGCTGCACGGCTGCGGCCTTGTTGTACTGCAAGGTTGACGCCGCGTTCCTGTGCGGCGCCTGCGACTCGAAGCTCCACCGCCACCTGTGCCACGAGCGCGTGTGGATCTGCGAGGTGTGCGAGCAGGCGCCGGCTGCAGTGACTTGCAAAGCGGACGCAGCTGTTCTGTGCACGGCCTGCGACCACGACATCCACTCTGCCAACCCCCTCGCACGCCGCCACGAGCGGGTCCCGGTGGTCCCGTTCCTCGACTCTGCCGACGACGCGGCGGTCGTCCGCTCCTCCTCCACCGCTGCCCCTGCAGCTGCCACCTCGTTACTAATCTCCGACGACCTGGCTGCGGTTCCGGCTCCGATCGCTCCGGCTTTGCTGCGTGGTGGCGATGGCGATGACGACGAGATTGACGCTGAGACGTGGCTCATTCCTAACCCTAGCTTCTTGTATAGTAATGACTCTGACTTGCTTCACCACCATTTCGGACCTCCTTCTCTTAGCTCCTCTCTCAACAACCTCAACCACAATTCTCAACAAGAACAGCAACACAAGATGAACATTCAACAGCAACACAAGATGAAAATTCAACAACAACAACAACACAAGATAAACATTCAACAACAACAACACAAGATGAACATTCAACAACAGAGTGCGAGTTTTGCGTTTACCGACAGTGTTGTGCCGTCACAATCAAACGGGAACTTGAGCTTCTCAAACGACGTGACTCATTCCTTCCAAAATTGCTTCGACATCGACTTCTCTCAGCCTCACAAGCACCACAACAAGATCATCTCCGCCTTCAATAGTTACTCCTCTCCACTCAGCGTAATTACTTCACCTTCATCAATCCAATCGAATCAAATCAAAATCAATTACAACAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_2909.p1 GENE.R_Transcript_2909~~R_Transcript_2909.p1 ORF type:complete len:316 (+),score=3.31,zf-B_box|PF00643.20|0.0023,zf-B_box|PF00643.20|1.9e-06,zf-B_box|PF00643.20|5.6e+03 R_Transcript_2909:128-1075(+)
MVTLDEENFKGLLGLAARPCDTCCTAAALLYCKVDAAFLCGACDSKLHRHLCHERVWICEVCEQAPAAVTCKADAAVLCTACDHDIHSANPLARRHERVPVVPFLDSADDAAVVRSSSTAAPAAATSLLISDDLAAVPAPIAPALLRGGDGDDDEIDAETWLIPNPSFLYSNDSDLLHHHFGPPSLSSSLNNLNHNSQQEQQHKMNIQQQHKMKIQQQQQHKINIQQQQHKMNIQQQSASFAFTDSVVPSQSNGNLSFSNDVTHSFQNCFDIDFSQPHKHHNKIISAFNSYSSPLSVITSPSSIQSNQIKINYNN*

Click here to download the sequence:
Link to NCBI Protein BLAST