Transcript Information: R_Transcript_290972.p1


Annotated TAIR IDAT1G49975.1
Annotated Gene NameINVOLVED IN: photosynthesis; LOCATED IN: photosystem I, chloroplast, thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit N (InterPro:IPR008796); Has 34 Blast hits to 34 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18504845-18505431 | Forward length=129
E-Value2.9E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.70203695979687
Replicate 20.32302000640459
Replicate 30.52861702144967
Condition 2: 8 Hour
Replicate 10.94176403643251
Replicate 20.34401356678747
Replicate 30.13962777400298
Condition 3: 24 Hour
Replicate 10.52979555140856
Replicate 20.16965583761983
Replicate 30.16836695912998


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_290972.p1 GENE.R_Transcript_290972~~R_Transcript_290972.p1 ORF type:complete len:130 (+),score=27.08 R_Transcript_290972:94-483(+)
ATGGCTCTTGCAAGTTATACTACCAATTTTGCATCAAATAATGCACAAAGATTCCAACACCAAGGGAGAAATGTAAGTACTGCAACAAGAAAGTTCACCAATATTACTGGAAGGAGAGGAATTCTCCTATCTTCTACGACGTCGACTATATTACTAGCAGTTGCAGCAACAGATGATGCCATTGATTCCAGGACAGCTCTCCTTCAAAAGTATTTGAAGAAGTCAGAGGAGAATAAGGAAAAGAATGACAAAGAGAGATTGGATAATTACTACAAACGCAATTACAAAGATTACTTTGGATTTGTAGAGGGTACGCTGAGAGCCAAAGAAGAGCAACAACTTTCTGAATCAGAGAAGGGTATTCTTGAATGGTTAGATAAGAATAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_290972.p1 GENE.R_Transcript_290972~~R_Transcript_290972.p1 ORF type:complete len:130 (+),score=27.08 R_Transcript_290972:94-483(+)
MALASYTTNFASNNAQRFQHQGRNVSTATRKFTNITGRRGILLSSTTSTILLAVAATDDAIDSRTALLQKYLKKSEENKEKNDKERLDNYYKRNYKDYFGFVEGTLRAKEEQQLSESEKGILEWLDKNK*

Click here to download the sequence:
Link to NCBI Protein BLAST