Transcript Information: R_Transcript_2913.p1


Annotated TAIR IDAT5G57660.1
Annotated Gene NameCONSTANS-like 5
Annotated Gene Symbol(s)ATCOL5, COL5
Annotation TypeHomolog
Chromosome Positionchr5:23355573-23356729 | Forward length=355
E-Value5E-65
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 136.226539854008
Replicate 231.869384560452
Replicate 336.872835263194
Condition 2: 8 Hour
Replicate 16.8710335311147
Replicate 29.2409766792655
Replicate 38.6127540188571
Condition 3: 24 Hour
Replicate 129.517180721334
Replicate 219.973512515701
Replicate 327.694646746686


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_2913.p1 GENE.R_Transcript_2913~~R_Transcript_2913.p1 ORF type:complete len:392 (+),score=-11.76,CCT|PF06203.10|6.4e-18,zf-B_box|PF00643.20|0.025,zf-B_box|PF00643.20|3.7e-06,zf-B_box|PF00643.20|7.2e+03 R_Transcript_2913:122-1297(+)
ATGGAGACACTATATGAGGAAAACTTCAAGGGCTTGCTAGGCCTAGCGGCCCGGCCGTGCGACACGTGCTGCGCGGCTGCAGCCTCGCTGTACTGGAAGGTTGACGCGGCGTTCCTGTGCGGCGCCTGTGACTTGAAGCTCCACCGCCATGCGCGCCACGAGCGTGTGTGGATGTGCGAGGTGTGCGAGCAGGCGCCGGCTGCAGTGACTTGCAAAGCGGACGCAGCTGTTCTGTGCACGGCCTGCGACCACGACATCCACTCTGCCAACCCCCTCGCACGCCGCCACGAGCGGGTCCCAGTGGTCCCGTTCATCGACTCTGCCGACGATGCGGCCGTCGTCCGCTCCTCCACCGCTGCCCCTGCAGTCGCCACGTCGCTACTAATCTCCGACGACCTGGCTGCCGTCCCAGCTCCGATCGCTCCGGCTTTGCTCTGTGGCGGCGATAACGATGAGATTGACGCTGAGATGTGGCTCATTCCTAACCCTAGCTTCTTGTATAGTAATGACTCTGACTTGCTTCACCACCATTTCGGACCTCCTTCTCTTAGCTCCTCTCTCAACAACCTCAACCACAATTCTCAACAACAACACCACAAGATGAACATTCAAAAACAGCAACAACAACAACAGAGTGCGAGTTTCGCGTTTACCGACAGTGTTGTGCCGTCACAATCAAACGGGAACTTGAGCTTCTCAAAGGACGTGACTCATTCCTTTCAAAATTGCTTCGATATCGACTTCTCTCAGCCTCACAAGCACCACAACAAGATCATCTCCGCCTTCAATAGTTACTCCTCTCCACTCAGCTTTTCGTCGTCGGATATTGGAGTAGTACCAGATGGAAACGCGAACTCGATGTCGGAGGTCTCATACACGTTCGCGAAGTCGACAACCACCATAGACGGCGGCTCGTCGGATAATACCGGATCTCCGGCGCCGGTGATAGACCGGGAGGCCAGGGTTTTGAGGTACAGAGAGAAAAGGAAGAACCGGAAATTCGAGAAAACAATTAGGTACGCTTCCAGAAAGGCTTACGCTGAAACAAGGCCCAGAATTAAAGGCCGTTTCGCCAAACGTACCGAAACCAACGACGTCGTTTCCGAGATCGATCAGATTTACGGGGCCGGGTTCGGGCTTGATCACGGCGGGTACGGCGTCGTTCCGTCCTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_2913.p1 GENE.R_Transcript_2913~~R_Transcript_2913.p1 ORF type:complete len:392 (+),score=-11.76,CCT|PF06203.10|6.4e-18,zf-B_box|PF00643.20|0.025,zf-B_box|PF00643.20|3.7e-06,zf-B_box|PF00643.20|7.2e+03 R_Transcript_2913:122-1297(+)
METLYEENFKGLLGLAARPCDTCCAAAASLYWKVDAAFLCGACDLKLHRHARHERVWMCEVCEQAPAAVTCKADAAVLCTACDHDIHSANPLARRHERVPVVPFIDSADDAAVVRSSTAAPAVATSLLISDDLAAVPAPIAPALLCGGDNDEIDAEMWLIPNPSFLYSNDSDLLHHHFGPPSLSSSLNNLNHNSQQQHHKMNIQKQQQQQQSASFAFTDSVVPSQSNGNLSFSKDVTHSFQNCFDIDFSQPHKHHNKIISAFNSYSSPLSFSSSDIGVVPDGNANSMSEVSYTFAKSTTTIDGGSSDNTGSPAPVIDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTETNDVVSEIDQIYGAGFGLDHGGYGVVPSF*

Click here to download the sequence:
Link to NCBI Protein BLAST