Transcript Information: R_Transcript_291386.p1


Annotated TAIR IDAT5G47500.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19271262-19272845 | Reverse length=362
E-Value4.9E-193
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.591070815489
Replicate 211.865096849835
Replicate 316.464217647235
Condition 2: 8 Hour
Replicate 19.2459646285171
Replicate 26.2889980178334
Replicate 39.1703449488413
Condition 3: 24 Hour
Replicate 113.571412085127
Replicate 28.5004643640767
Replicate 315.845786205618


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_291386.p1 GENE.R_Transcript_291386~~R_Transcript_291386.p1 ORF type:complete len:384 (+),score=44.84,Pectinesterase|PF01095.15|5.2e-61 R_Transcript_291386:168-1319(+)
ATGGGTTCATTATCTTATAGTTGTAGTAGCAATTTCAAGTACTTGGTATTTAGTGCTTTGCTGTACTTACTAATGTTATTATTTTTGTCGCATGCAACGTTGCAGGTCACGGGTTGCCGTCACAACCACCACCATCGTGGGAAACGAGGTGCTGCGTCACCATCACCACCACCACCACCATCGCCGAAGGGTCATACAACAAAGGGACACCATAAGTGGGTGGGGCCAACGGGCTACCGGCATGTTGTCGTGGACATTGGCGGTGCTGGAGACTTCATTTCCGTCCAAGCGGCTGTGGATGCTGTGCCGGAGAATAATATGGTTAATGTCATCATCCACATTGGTCCTGGAATCTACATGGAAAAGGTAACAGTAGCAGCACAAAAGCCATACATAACATTTCAAGGGGCAGGGAGGGACGTAACGGTTATAGAATGGCACGATAGGGCCTGTGATCTCGGCTCTGACGGCCAAGAACTCCGTACCTACCGGACCGCTTCGGTTACTGTCTTTGCCAATTACTTCTCTGCCAGAAACATCAGCTTCAAGAACACGGCCCCAGCACCTTTGCCAGGCATGGAAGGATGGCAAGCAGCAGCGTTCAGGATATCAGGGGACAAGGCTTATTTCTCTGGGTGTGGATTTTATGGTCACCAGGATACTTTATGTGATGATGCTGGTCGTCATTATTTCAAAGATTGTTACATTGAGGGTTCCATTGACTTCATCTTTGGCAATGGCCGTTCCATGTACAAAGACTGCAAGATACACTCAACAGCAACGAGGTTTGGGTCGATAGCAGCACAAGACAGAAGGACCCCAGACGAGAAGACAGGGTTTGCATTCGTGAATTGCAGGGTGACAGGGACTGGACCACTCTATGTGGGCCGAGCAATGGGCCAGTATTCAAGAATTGTCTATTCTTACACTTACTTCGATGACCTTGTTGCCCATGGTGGCTGGGATGATTGGGACCATAACAGCGGCAAAAACAAGACGGCATTCTTTGGGGTTTACAAGTGCTGGGGGGCAGGAGCAGAGTCAGTCCGTGGACTGTCATGGGCGAGAGAGCTTGACTATGATACTGCCCACCCATTCCTTGCTAAGAGCTTCGTCAATGGCAGGCATTGGATAGCACCATCTGATGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_291386.p1 GENE.R_Transcript_291386~~R_Transcript_291386.p1 ORF type:complete len:384 (+),score=44.84,Pectinesterase|PF01095.15|5.2e-61 R_Transcript_291386:168-1319(+)
MGSLSYSCSSNFKYLVFSALLYLLMLLFLSHATLQVTGCRHNHHHRGKRGAASPSPPPPPSPKGHTTKGHHKWVGPTGYRHVVVDIGGAGDFISVQAAVDAVPENNMVNVIIHIGPGIYMEKVTVAAQKPYITFQGAGRDVTVIEWHDRACDLGSDGQELRTYRTASVTVFANYFSARNISFKNTAPAPLPGMEGWQAAAFRISGDKAYFSGCGFYGHQDTLCDDAGRHYFKDCYIEGSIDFIFGNGRSMYKDCKIHSTATRFGSIAAQDRRTPDEKTGFAFVNCRVTGTGPLYVGRAMGQYSRIVYSYTYFDDLVAHGGWDDWDHNSGKNKTAFFGVYKCWGAGAESVRGLSWARELDYDTAHPFLAKSFVNGRHWIAPSDA*

Click here to download the sequence:
Link to NCBI Protein BLAST