Transcript Information: R_Transcript_2915.p1


Annotated TAIR IDAT5G57660.1
Annotated Gene NameCONSTANS-like 5
Annotated Gene Symbol(s)ATCOL5, COL5
Annotation TypeHomolog
Chromosome Positionchr5:23355573-23356729 | Forward length=355
E-Value2E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5574198766825
Replicate 20.28663891353308
Replicate 31.5635998359148
Condition 2: 8 Hour
Replicate 10.16713900987881
Replicate 20.91580403445129
Replicate 30.2478035579575
Condition 3: 24 Hour
Replicate 11.175314363193
Replicate 20.82801313241075
Replicate 31.4193392117783


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_2915.p1 GENE.R_Transcript_2915~~R_Transcript_2915.p1 ORF type:complete len:293 (+),score=-0.33,zf-B_box|PF00643.20|0.002,zf-B_box|PF00643.20|1.7e-06,zf-B_box|PF00643.20|5.2e+03 R_Transcript_2915:128-1006(+)
ATGGTGACACTAGATGAGGAAAACTTCAAGGGCTTGCTAGGCCTAGCGGCCCGGCCATGCGACACGTGCTGCACGGCTGCGGCCTTGTTGTACTGCAAGGTTGACGCCGCGTTCCTGTGCGGCGCCTGCGACTCGAAGCTCCACCGCCACCTGTGCCACGAGCGCGTGTGGATCTGCGAGGTGTGCGAGCAGGCGCCGGCTGCAGTGACTTGCAAAGCGGACGCAGCTGTTCTGTGCACGGCCTGCGACCACGACATCCACTCTGCCAACCCCCTCGCACGCCGCCACGAGCGGGTCCCGGTGGTCCCGTTCCTCGACTCTGCCGACGACGCGGCGGTCGTCCGCTCCTCCTCCACCGCTGCCCCTGCAGCTGCCACCTCGTTACTAATCTCCGACGACCTGGCTGCGGTTCCGGCTCCGATCGCTCCGGCTTTGCTGCGTGGTGGCGATGGCGATGACGACGAGATTGACGCTGAGACGTGGCTCATTCCTAACCCTAGCTTCTTGTATAGTAATGACTCTGACTTGCTTCACCACCATTTCGGACCTCCTTCTCTTAGCTCCTCTCTCAACAACCTCAACCACAATTCTCAACAACAACACCACAAGATGAACATTCAAAAACAGCAACAACAACAACAGAGTGCGAGTTTCGCGTTTACCGACAGTGTTGTGCCGTCACAATCAAACGGGAACTTGAGCTTCTCAAAGGACGTGACTCATTCCTTTCAAAATTGCTTCGATATCGACTTCTCTCAGCCTCACAAGCACCACAACAAGATCATCTCCGCCTTCAATAGTTACTCCTCTCCACTCAGCGTAATTACTTCACCTTCATCAATCCAATCGAATCAAATCAAAATCAATTACAACAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_2915.p1 GENE.R_Transcript_2915~~R_Transcript_2915.p1 ORF type:complete len:293 (+),score=-0.33,zf-B_box|PF00643.20|0.002,zf-B_box|PF00643.20|1.7e-06,zf-B_box|PF00643.20|5.2e+03 R_Transcript_2915:128-1006(+)
MVTLDEENFKGLLGLAARPCDTCCTAAALLYCKVDAAFLCGACDSKLHRHLCHERVWICEVCEQAPAAVTCKADAAVLCTACDHDIHSANPLARRHERVPVVPFLDSADDAAVVRSSSTAAPAAATSLLISDDLAAVPAPIAPALLRGGDGDDDEIDAETWLIPNPSFLYSNDSDLLHHHFGPPSLSSSLNNLNHNSQQQHHKMNIQKQQQQQQSASFAFTDSVVPSQSNGNLSFSKDVTHSFQNCFDIDFSQPHKHHNKIISAFNSYSSPLSVITSPSSIQSNQIKINYNN*

Click here to download the sequence:
Link to NCBI Protein BLAST