Transcript Information: R_Transcript_2916.p1


Annotated TAIR IDAT5G57660.1
Annotated Gene NameCONSTANS-like 5
Annotated Gene Symbol(s)ATCOL5, COL5
Annotation TypeOrtholog
Chromosome Positionchr5:23355573-23356729 | Forward length=355
E-Value1.7E-85
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 162.429747467911
Replicate 268.410730723483
Replicate 370.227998047951
Condition 2: 8 Hour
Replicate 124.423875415733
Replicate 227.116107346653
Replicate 326.10155653767
Condition 3: 24 Hour
Replicate 154.110679820234
Replicate 250.364160808356
Replicate 355.079439136142


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_2916.p1 GENE.R_Transcript_2916~~R_Transcript_2916.p1 ORF type:complete len:395 (+),score=-19.39,CCT|PF06203.10|6.5e-18,zf-B_box|PF00643.20|0.0077,zf-B_box|PF00643.20|2.7e-06,zf-B_box|PF00643.20|7.3e+03 R_Transcript_2916:128-1312(+)
ATGGTGACACTAGATGAGGAAAACTTCAAGGGCTTGCTAGGCCTAGCGGCCCGGCCATGCGACACGTGCTGCACGGCTGCGGCCTTGTTGTACTGCAAGGTTGACGCCGCGTTCCTGTGCGGCGCCTGCGACTCGAAGCTCCACCGCCACCTGTGCCACGAGCGCGTGTGGATCTGCGAGGTGTGCGAGCAGGCGCCGGCTGCAGTGACTTGCAAAGCGGACGCAGCTGTTCTGTGCACGGCCTGCGACCACGACATCCACTCTGCCAACCCCCTCGCACGCCGCCACGAGCGGGTCCCGGTGGTCCCGTTCCTCGACTCTGCCGACGACGCGGCGGTCGTCCGCTCCTCCTCCACCGCTGCCCCTGCAGCTGCCACCTCGTTACTAATCTCCGACGACCTGGCTGCGGTTCCGGCTCCGATCGCTCCGGCTTTGCTGCGTGGTGGCGATGGCGATGACGACGAGATTGACGCTGAGACGTGGCTCATTCCTAACCCTAGCTTCTTGTATAGTAATGACTCTGACTTGCTTCACCACCATTTCGGACCTCCTTCTCTTAGCTCCTCTCTCAACAACCTCAACCACAATTCTCAACAACAACACCACAAGATGAACATTCAAAAACAGCAACAACAACAACAGAGTGCGAGTTTCGCGTTTACCGACAGTGTTGTGCCGTCACAATCAAACGGGAACTTAAGCTTCTCAAACGACGCGACTCGTTCCTTCCAAAATTGCTTCGACATCGACTTCTCTCAGCCTCACAAGCACCACAACAAGATCATCTCCACCTTCACTAATTACTCCTCTCCACACAGCGTTTCATCGTCGGATATCGGAGTAGTACCAGACGGAAACGCGAACTCGATGTCGGAGGTCTCATACACGTTCGCGAAGTCAACAACTACCGGAGACGGTGGCTCGTCGACGAATACCGGATCTCCGGCGCCGGTGATAGACCGGGAGGCCAGGGTTTTGAGGTACAGAGAGAAAAGGAAGAACCGGAAATTCGAGAAAACAATTAGGTACGCTTCCAGAAAGGCTTACGCTGAAACAAGGCCCAGAATTAAAGGCCGTTTCGCCAAACGTACCGAAACCAACGACGTCGTTTCCGAGATCGATCAGATTTACGGGGCCGGGTTCGGGCTTGATCACGGCGGGTACGGCGTCGTTCCGTCCTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_2916.p1 GENE.R_Transcript_2916~~R_Transcript_2916.p1 ORF type:complete len:395 (+),score=-19.39,CCT|PF06203.10|6.5e-18,zf-B_box|PF00643.20|0.0077,zf-B_box|PF00643.20|2.7e-06,zf-B_box|PF00643.20|7.3e+03 R_Transcript_2916:128-1312(+)
MVTLDEENFKGLLGLAARPCDTCCTAAALLYCKVDAAFLCGACDSKLHRHLCHERVWICEVCEQAPAAVTCKADAAVLCTACDHDIHSANPLARRHERVPVVPFLDSADDAAVVRSSSTAAPAAATSLLISDDLAAVPAPIAPALLRGGDGDDDEIDAETWLIPNPSFLYSNDSDLLHHHFGPPSLSSSLNNLNHNSQQQHHKMNIQKQQQQQQSASFAFTDSVVPSQSNGNLSFSNDATRSFQNCFDIDFSQPHKHHNKIISTFTNYSSPHSVSSSDIGVVPDGNANSMSEVSYTFAKSTTTGDGGSSTNTGSPAPVIDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTETNDVVSEIDQIYGAGFGLDHGGYGVVPSF*

Click here to download the sequence:
Link to NCBI Protein BLAST