Transcript Information: R_Transcript_29171.p1


Annotated TAIR IDAT4G36860.1
Annotated Gene NameLIM domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:17358580-17361189 | Reverse length=553
E-Value1.7E-221
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.274424732039
Replicate 227.233695100638
Replicate 328.6094609726
Condition 2: 8 Hour
Replicate 126.381214326007
Replicate 234.009123637117
Replicate 339.49304402762
Condition 3: 24 Hour
Replicate 127.520551341997
Replicate 222.562806689314
Replicate 328.252539313422


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_29171.p1 GENE.R_Transcript_29171~~R_Transcript_29171.p1 ORF type:complete len:478 (+),score=91.04,DUF3633|PF12315.4|6.6e-94,LIM|PF00412.18|1.8e-07,LIM|PF00412.18|1.2e+02,LIM|PF00412.18|1.9e+03 R_Transcript_29171:995-2428(+)
ATGGGTTGGCTTAGCAAAATTTTCAAGGGTTCCAACCATAACGTGTTAGAAGAACATAATTACAACGGTTATTCAGAGGATCCCATCTGGAATCCAGCTTCTACGTCAGGGGATACACAGCTTGAAGATGAAGACATTGATCGAGCAATTGCATTGTCACTTTTGGAAGAGGACCAGAAAGGCAAATCTGTCCTTGACTATGAATCTCAAGTGAAAGAAGATGAAGAACTTGCCAGAGCTCTTCAAGAAAGTTTGAAAGTTGAGTCTCCTCCACGAAATGGGCATGGAAATGGGAGCATGGCTCAACCTATTACAGTTCCCTATCCAACAGGGTTTAGGATCTGCGCTGGATGCCATTCTGAGATTGGTTATGGACGTTTTTTAAGTTGCATGGGTGGACTTTGGCATCCTGAATGCTTTAGATGCCATGCTTGCAATTTACCCATTTCAGGTTATGAGTTCTCTATGTGTGGAGGTTATCCTTACCACAAAAATTGCTACAAAGAGCAGTACCATCCAAAATGTGGAGTGTGTAAGCAGTTTATTCCAACAAATGCTGCTGGTCTTATTGAGTACAGGGCACATCCTTTCTGGGACCAGAAGTACTGTCCTGTTCATGAGCTTGATGGAACTCCAAGGTGCTGTAGTTGTGAACGGATGGAGCCACAGGACACAGGATATGTTTGTCTTGACGATGGTCGGAAATTATGCTTGGAGTGTTTGGATTCTGCTGTCATGGATACGAATCAATGTCAGCCGCTTTATCTTGACATACAAGAATTTTATGAAAGCTTAAATATGAAAGTGGAGCAGCAAGTTCCATTGCTCTTGGTGGAGAGGCAAGCGCTGAATGAAGCCATGGAGGGTGAAAAGCAAGGCCATCACCATATGCCTGAGACAAGAGGACTTTGTCTCTCCGAGGAGCAAACTATCTCCACTGTACGAAGACCAAGGTTTGGAGCTGGATATAGACCGACGGACATGATCACAGAGCCATATAGGCTAACAAGGCGTTGCGAGGTTACTGCAATCCTTGTTTTGTATGGGCTTCCCAGGTTGCTAACTGGATCAATCTTGGCTCATGAGATGATGCATGCTTGGCTTCGCCTTAAAGGTTTCCGTATGCTTAACCCACAAATCGAGGAAGGTATTTGTCAGGTGCTGGCTTACATGTGGCTAGAATCAGAGCTCAATTCTACCTCTGGTAACAGCAACAGATCAATCTCGTCTTCCAACATTGCTCACAGTTCATTGAGAAGCAACAAAAGATCACCATTCGAGATGAAGCTGGGTAAATTCTTCCGAAACCAGATAGAGTCCGACATTTCCCCGGTATATGGGGATGGTTTTAGAGCTGCTCACCAGGCAGTGCTGAAATACGGCCTTCAGACTACACTCAACCATATACAGATGACTGGATGCCTTCCTTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_29171.p1 GENE.R_Transcript_29171~~R_Transcript_29171.p1 ORF type:complete len:478 (+),score=91.04,DUF3633|PF12315.4|6.6e-94,LIM|PF00412.18|1.8e-07,LIM|PF00412.18|1.2e+02,LIM|PF00412.18|1.9e+03 R_Transcript_29171:995-2428(+)
MGWLSKIFKGSNHNVLEEHNYNGYSEDPIWNPASTSGDTQLEDEDIDRAIALSLLEEDQKGKSVLDYESQVKEDEELARALQESLKVESPPRNGHGNGSMAQPITVPYPTGFRICAGCHSEIGYGRFLSCMGGLWHPECFRCHACNLPISGYEFSMCGGYPYHKNCYKEQYHPKCGVCKQFIPTNAAGLIEYRAHPFWDQKYCPVHELDGTPRCCSCERMEPQDTGYVCLDDGRKLCLECLDSAVMDTNQCQPLYLDIQEFYESLNMKVEQQVPLLLVERQALNEAMEGEKQGHHHMPETRGLCLSEEQTISTVRRPRFGAGYRPTDMITEPYRLTRRCEVTAILVLYGLPRLLTGSILAHEMMHAWLRLKGFRMLNPQIEEGICQVLAYMWLESELNSTSGNSNRSISSSNIAHSSLRSNKRSPFEMKLGKFFRNQIESDISPVYGDGFRAAHQAVLKYGLQTTLNHIQMTGCLPF*

Click here to download the sequence:
Link to NCBI Protein BLAST