Transcript Information: R_Transcript_291730.p1


Annotated TAIR IDAT4G04370.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:2134060-2136249 | Reverse length=729
E-Value6.4E-264
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.68235368055023
Replicate 20.36442176957527
Replicate 30.51991260231588
Condition 2: 8 Hour
Replicate 10.29422267626863
Replicate 20.38810609337171
Replicate 30.46045474203919
Condition 3: 24 Hour
Replicate 10.61302556015231
Replicate 20.44169410328259
Replicate 31.0227899386401


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_291730.p1 GENE.R_Transcript_291730~~R_Transcript_291730.p1 ORF type:complete len:749 (+),score=127.22,PPR_2|PF13041.2|7.4e-05,PPR_2|PF13041.2|0.0083,PPR_2|PF13041.2|1.1e-07,PPR_2|PF13041.2|0.096,PPR_2|PF13041.2|2.1e-09,PPR_2|PF13041.2|76,PPR_2|PF13041.2|1e-05,PPR_2|PF13041.2|1.4,PPR_2|PF13041.2|1.5e-10,PPR_2|PF13041.2|21,PPR_2|PF13041.2|4.9e-07,PPR_2|PF13041.2|0.98,PPR_2|PF13041.2|0.56,PPR|PF01535.16|50,PPR|PF01535.16|6.2e+03,PPR|PF01535.16|0.00064,PPR|PF01535.16|1e-05,PPR|PF01535.16|0.005,PPR|PF01535.16|3.5e-07,PPR|PF01535.16|1.3,PPR|PF01535.16|6.9e-06,PPR|PF01535.16|0.035,PPR|PF01535.16|9.8e-05,PPR|PF01535.16|3.5e+03,PPR|PF01535.16|0.056,PPR|PF01535.16|2.8e-05,PPR|PF01535.16|0.32,PPR|PF01535.16|0.17,PPR|PF01535.16|6.6e+02,PPR_3|PF13812.2|25,PPR_3|PF13812.2|3.3e+03,PPR_3|PF13812.2|0.0038,PPR_3|PF13812.2|0.0075,PPR_3|PF13812.2|0.058,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|10,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|19,PPR_3|PF13812.2|5.5,PPR_3|PF13812.2|5.3e+03,PPR_3|PF13812.2|19,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|29,PPR_3|PF13812.2|1.8,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|0.42,PPR_1|PF12854.3|6.8e+03,PPR_1|PF12854.3|1.4,PPR_1|PF12854.3|0.00096,PPR_1|PF12854.3|9e+02,PPR_1|PF12854.3|8.9e+02,PPR_1|PF12854.3|2.9e+02,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|0.00012,PPR_1|PF12854.3|79,PPR_1|PF12854.3|11,PPR_1|PF12854.3|8.2,PPR_1|PF12854.3|0.0013 R_Transcript_291730:58-2304(+)
ATGAGCAAACTCAAATCCTACTTAAGGCCACCACCATTACTATCCACCAAGTCATTCAATTTCGCCATTAACCGCCTTTCTTCAGAGGGTTCTCACCATGAGGTTCTCTTCACCTTCTCTTCTATGCTCAACTCTCATATTCCACCTGATGCTCACACTTACCCTAGTCTTTTCAAAGCATGCACTTACTTAAACAGGTTTTCACTTGGTTTTTCATTACATCATCGTGTAATCGTTGAAGGGTTTTCTTCAGATTCCTTCATTTCGTCTTCCCTCATCAATTTGTATGCCAAGTTTGGTCAGGTGAATAATGCACAGAAGGTGTTTGACTTAATGCCTGAGAGAAATGTAGTTCCTTGGACTGCTATGATTGGGTGCTACTCTCGTTGTGGGGATCTTGGTAGAGCGTTTTGGATGTATAATATGATGAGGTATGAGGGAGTTTCACCTAGCTCTGTTACTGTTTTGAATGTGCTATCTGGGGTCTGTGAGGTTGTCAGGTTGGAATGTTTACAGGCGAGTACGATTCGTTCTGGTTTGGATTCTGATAATCATTTGGTTAATTGTATGTTGAATTTGTATGGAAAATGTGGGAGAGTTGAGGCTGCTAGGGACTTGTTTGAAGCATTGGGTGATAGGGATATTGTTTCATGGAATTCATTGGTGTCTGGTTATGCTCAAACTGGGGATATTGAGGAAGTTTTGTGCCTTTTGAAGAGAATGAGGATTGAGGGTGTTAGTCCTGATAAACAGACTTTTGGGGCTCTTTTGACTTGCTCTAGTGTTTTGCAGACCGATGTGGAGTTGGGAAGGTTGATTCATGCGCAAATTATTACAGGTGGGTTAGAAGTGGATGCCCATGTAGCTACTACTCTCGTGGTCTTGTACTCAAAATATGGAAATGTTGCTGGTGCGATTAAGATATTTAAAAGGGTCGAAGAGAAGGATGTGATTCTGTGGACTTCTATGATTTCTGCCTGTGTACAGAATGATGGTGGACATAAAGCATTGATGCTCTTTAGGCAGATGATGGAATCTGGGTTCACACCCTCCACTGCAGCTATAGCTACTGCTCTTGCTGCTTGTGCGAAAGTTAGTTCACGCCTGCTTGGGGCTTCAGTACATGGGTATCTAGTACGGCAAAGGATCAAAGTAGATATTCCCATTCAAAATTCACTTATTACTATGTATGCAAAGTGTGGATTTTTAAGGCAAAGTTCGACTATTTTTGATGATATGAATGAAAGAGATGTAGTTTCATGGAACGCAATTGTTGCAGCATATGCTCAAGATGGGAATTTATCTAAGGCACTTTGCTTTCTTAATGATATGAGATCAATGCGCCAAAAACCGGATTCTATTACCGTTGTTTCCCTGCTCCAAGCTTGTGCTTCCACCGGGGCACTTCAACAAGGAAAGTGGATCCACAACTTCGTTATTAAAAGCTTTTCACAGCCAAGCATCATGGTTGACACTGCTTTGGTTGACATGTATTCAAAATGTGGCGACCTGAAAACTGCTCACAGATGTTTATTAGAGATGCCAGAGCATGATATTGTGTCATGGAGCACAATCATCACATGCTATGGTAGTCATGGCATGGGAGAGATGGCTGTAAAACTTTATTCAGACTTTCTACGCTCTGGGATTCAGCCCAACCAAGTCATCTTCCTTTCTGTCCTTTTCGCTTGCAGTCATAATGGGCTGGTTGCCGAAGGTCTGAGCTTATTCAGAACAATGACTGAAGAATTTGGTATTAAACCAGAACTAGAACACTGTGCCTGCATTGTTGATCTGCTCTGTCGAGCAGGAAGGTTAGAAGAGGCATACAACTTCATCAAGACTATGTCCTCTAATCCTACGGTTGAGATTTTAGGCATACTTGTTGATGCATGTAGGACGAAGGGCAATGCCAAACTTGGAGAAATTGTTGCAAGAGACATCATGCTGCTGAAGCCTGTTTATGCTGAGAATTATGTGCAACTTGCTCATAGTTATGCTTCAATGAATAGATGGGAGGGAGTAGGTGATGCATGGACACAAATGAAGGCTCTCGGATTGAGAAAACTACCTGGTTGGACCTGTATTCAGCAGCATGGAAAGGTTACAATATTTTTTACAGGTCAGACTACCCATCATCTGTACAAAGAAATGATGTGGGTCTTGAAAATTTTGGGCAATCACATGGATGATCTCAGGTTCAACCACAATAGCAGTGAGCTGCATTGTATCTTGAATGACATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_291730.p1 GENE.R_Transcript_291730~~R_Transcript_291730.p1 ORF type:complete len:749 (+),score=127.22,PPR_2|PF13041.2|7.4e-05,PPR_2|PF13041.2|0.0083,PPR_2|PF13041.2|1.1e-07,PPR_2|PF13041.2|0.096,PPR_2|PF13041.2|2.1e-09,PPR_2|PF13041.2|76,PPR_2|PF13041.2|1e-05,PPR_2|PF13041.2|1.4,PPR_2|PF13041.2|1.5e-10,PPR_2|PF13041.2|21,PPR_2|PF13041.2|4.9e-07,PPR_2|PF13041.2|0.98,PPR_2|PF13041.2|0.56,PPR|PF01535.16|50,PPR|PF01535.16|6.2e+03,PPR|PF01535.16|0.00064,PPR|PF01535.16|1e-05,PPR|PF01535.16|0.005,PPR|PF01535.16|3.5e-07,PPR|PF01535.16|1.3,PPR|PF01535.16|6.9e-06,PPR|PF01535.16|0.035,PPR|PF01535.16|9.8e-05,PPR|PF01535.16|3.5e+03,PPR|PF01535.16|0.056,PPR|PF01535.16|2.8e-05,PPR|PF01535.16|0.32,PPR|PF01535.16|0.17,PPR|PF01535.16|6.6e+02,PPR_3|PF13812.2|25,PPR_3|PF13812.2|3.3e+03,PPR_3|PF13812.2|0.0038,PPR_3|PF13812.2|0.0075,PPR_3|PF13812.2|0.058,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|10,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|19,PPR_3|PF13812.2|5.5,PPR_3|PF13812.2|5.3e+03,PPR_3|PF13812.2|19,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|29,PPR_3|PF13812.2|1.8,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|0.42,PPR_1|PF12854.3|6.8e+03,PPR_1|PF12854.3|1.4,PPR_1|PF12854.3|0.00096,PPR_1|PF12854.3|9e+02,PPR_1|PF12854.3|8.9e+02,PPR_1|PF12854.3|2.9e+02,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|0.00012,PPR_1|PF12854.3|79,PPR_1|PF12854.3|11,PPR_1|PF12854.3|8.2,PPR_1|PF12854.3|0.0013 R_Transcript_291730:58-2304(+)
MSKLKSYLRPPPLLSTKSFNFAINRLSSEGSHHEVLFTFSSMLNSHIPPDAHTYPSLFKACTYLNRFSLGFSLHHRVIVEGFSSDSFISSSLINLYAKFGQVNNAQKVFDLMPERNVVPWTAMIGCYSRCGDLGRAFWMYNMMRYEGVSPSSVTVLNVLSGVCEVVRLECLQASTIRSGLDSDNHLVNCMLNLYGKCGRVEAARDLFEALGDRDIVSWNSLVSGYAQTGDIEEVLCLLKRMRIEGVSPDKQTFGALLTCSSVLQTDVELGRLIHAQIITGGLEVDAHVATTLVVLYSKYGNVAGAIKIFKRVEEKDVILWTSMISACVQNDGGHKALMLFRQMMESGFTPSTAAIATALAACAKVSSRLLGASVHGYLVRQRIKVDIPIQNSLITMYAKCGFLRQSSTIFDDMNERDVVSWNAIVAAYAQDGNLSKALCFLNDMRSMRQKPDSITVVSLLQACASTGALQQGKWIHNFVIKSFSQPSIMVDTALVDMYSKCGDLKTAHRCLLEMPEHDIVSWSTIITCYGSHGMGEMAVKLYSDFLRSGIQPNQVIFLSVLFACSHNGLVAEGLSLFRTMTEEFGIKPELEHCACIVDLLCRAGRLEEAYNFIKTMSSNPTVEILGILVDACRTKGNAKLGEIVARDIMLLKPVYAENYVQLAHSYASMNRWEGVGDAWTQMKALGLRKLPGWTCIQQHGKVTIFFTGQTTHHLYKEMMWVLKILGNHMDDLRFNHNSSELHCILNDI*

Click here to download the sequence:
Link to NCBI Protein BLAST