Transcript Information: R_Transcript_292055.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value1E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.43459430844568
Replicate 20.49991191467376
Replicate 30.40904888564558
Condition 2: 8 Hour
Replicate 10.87449517668733
Replicate 20.79860292289948
Replicate 30.43218120524731
Condition 3: 24 Hour
Replicate 10.54661445780248
Replicate 20.65640651460052
Replicate 30.52113582587851


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_292055.p1 GENE.R_Transcript_292055~~R_Transcript_292055.p1 ORF type:5prime_partial len:168 (+),score=14.40,zf-RVT|PF13966.2|3.4e-16,zf-RVT|PF13966.2|6.9e+03 R_Transcript_292055:3-506(+)
ATTTGGAAGGCTAAGTCCCCCATAAAGGTGAGGGCTTTTGTTTGGACCCTGGCTCTAGGGAGGATCAATACCAATGATATGCGACAACGACGGAGACCTTCTTCGTGCCTCTCCCCTGATATTTGTGTCATGTGCGGATCAAGTGGGGAGACCGCCTCTCATTTGTTTCTCCATTGTTCTGTAGTGAGATCTCTATGGGCTTCGCTTTTTGGTGTGCGTGGGGAAGCCGCGGTGTGCCCATCTAATGTGACAGAGTTCCTCCAAATCCATTTTTGGGGGCTTGGTCGGGATAAAGAGCTGGTTACTTTATGGCGTAATGCAATCCTTGCCGTCCTATGGTGTGTTTGGCTGGAGAGGAATGCTAGGGTATTTAATCAAGCTTCTCTCCCTCCTCCCCTATTATGGGAGCGTGTTACATTCTTGGCTTCCCTTTGGAGCAAGGCGGGGGGTGCTTTCCGTAGCTATTCTATTTCAGATGTACAACGCAATTGGGCTTCCTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_292055.p1 GENE.R_Transcript_292055~~R_Transcript_292055.p1 ORF type:5prime_partial len:168 (+),score=14.40,zf-RVT|PF13966.2|3.4e-16,zf-RVT|PF13966.2|6.9e+03 R_Transcript_292055:3-506(+)
IWKAKSPIKVRAFVWTLALGRINTNDMRQRRRPSSCLSPDICVMCGSSGETASHLFLHCSVVRSLWASLFGVRGEAAVCPSNVTEFLQIHFWGLGRDKELVTLWRNAILAVLWCVWLERNARVFNQASLPPPLLWERVTFLASLWSKAGGAFRSYSISDVQRNWASL*

Click here to download the sequence:
Link to NCBI Protein BLAST