Transcript Information: R_Transcript_292286.p1


Annotated TAIR IDAT5G13630.1
Annotated Gene Namemagnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)
Annotated Gene Symbol(s)GUN5, CCH, CHLH, CCH1, ABAR
Annotation TypeOrtholog
Chromosome Positionchr5:4387567-4392082 | Reverse length=1381
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.629975816115
Replicate 22.4728301790871
Replicate 33.558488860674
Condition 2: 8 Hour
Replicate 10.76076025486383
Replicate 20.48470119597946
Replicate 30.51149769811784
Condition 3: 24 Hour
Replicate 13.3176022005353
Replicate 22.2310232981798
Replicate 32.4196667753579


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_292286.p1 GENE.R_Transcript_292286~~R_Transcript_292286.p1 ORF type:complete len:1384 (+),score=369.10,CobN-Mg_chel|PF02514.12|6e+02,CobN-Mg_chel|PF02514.12|0,DUF3479|PF11965.4|1.4e-47 R_Transcript_292286:385-4536(+)
ATGGCTTCTGTTGTATCTTCACCATTCACCTTACCAACAACCAAAACAGACTCAATTTCACAAAAGCAGAAGATTTTACACTCATTTCTCCCTAAAAAAACAGCCCAATTCAACTCAAGGGAAGCAAGAAAAAGCTCAGTAAAATGTGTTGTAGGGGGTGGAAATGGTCTTTTCACACAAACGTCACCAGAAGTTCGACGAATTGTCCCAGAGAAAAACCAAAACCAAAACTTACCCACTGTGAAAATTGTGTATGTAGTCTTAGAAGCTCAGTACCAATCATCCCTTTCAGCAGCTGTTCAAACCCTTAACAAGAGTTCAAGTTTTGCAAAGTTTGAGGTTGTGGGGTACTTAGTTGAGGAGCTTAGGGATGAGAAAACTTACCAAACTTTCTGCAAAGACCTTGAGGATGCCAACATTTTTATTGGGTCCTTGATCTTTGTAGAAGAGCTTGCAATAAAAGTAAAGAATGCTGTGGAAAAAGAAAGGGAAAGAATGGATGCTGTTTTGGTATTCCCATCAATGCCTGAAGTTATGAGGCTTAACAAATTGGGTTCATTTAGTATGTCTCAACTTGGGCAATCAAAGAGCCCCTTTTTCCAGCTCTTTAAGAGGAAGAAACAAGGGGCTGGTTTTGCTGATAGTATGCTTAAACTTGTCAGAACTTTGCCTAAAGTTTTGAAGTATTTGCCTAGTGATAAGGCTCAAGATGCTAGGCTTTACATCTTGAGTTTACAGTTTTGGCTTGGTGGGTCCCCTGAGAATTTGATCAATTTTGTGAAGATGATTTCTGGGTCTTATGTTCCTGCCTTAAAAGGCATGAAGATTGAGTACTCTGACCCAGTTTTGTTCTTGGATAGTGGGATTTGGCACCCTTTGGCTCCTTGTATGTATGATGATGTCAAAGAGTACTTAAATTGGTATGGTACTAGAAGGGATGCTAGTGAGAAACTCAAGAGCAAAAATGCACCTGTAATTGGGTTGGTTCTTCAAAGAAGTCACATTGTTACTGGTGATGAGAGTCACTATGTGGCTGTGATTATGGAGCTTGAAGCTAGAGGGGCTAAGGTGATTCCTATTTTCGCCGGTGGGCTCGACTTTTCGGGTCCCGTTGAGAAGTTCTTCATTGATCCAATCACCAAGAAGCCTATGGTGAACTCTGTGGTTTCACTTACTGGATTTGCTCTTGTTGGAGGTCCAGCTAGGCAAGATCATCCTAGGGCTGTTGAGGCTTTGATGAAGCTTGATGTTCCTTACATTGTTGCTTTGCCCTTGGTTTTCCAAACTACTGAAGAGTGGTTGAATAGTACTTTGGGTTTGCACCCAATTCAGGTGGCTTTACAGGTTGCCCTTCCTGAGCTTGATGGTGGTATGGAGCCTATCGTCTTCTCTGGCCGTGATCCCAGAACAGGTAAATCACATGCTCTTCACAAGAGAGTGGAACAGCTTTGTACTAGAGCTATCAAATGGGCTGAGTTGAAGAGGAAATCAAAGGTTGAGAAGAAGCTTGCCATTACCGTATTCAGCTTCCCTCCTGACAAGGGAAATGTCGGAACTGCTGCCTATCTAAACGTGTTCGCCTCCATTTACTCAGTCTTGAAAGATCTCAAGAGGGATGGCTACACAGTTGAAGGACTTCCAGAGACAGCTGAAGCCTTGATCGAAGATGTGATCCATGACAAAGAGGCTCAATTCAACAGCCCGAATCTCAACGTTGCATACAAGATGAGTGTAAGGGAGTACCAGCAGCTAACTCCTTATGCAACACTATTGGAAGAAAACTGGGGCAAAGCTCCAGGCAATCTCAACTCAGATGGGGAGAACCTTTTGGTTTACGGAAAGCAGTATGGAAATGTGTTCATTGGAGTTCAGCCCACATTCGGGTATGAGGGTGATCCTATGAGGCTTCTTTTCTCGAAATCAGCTAGCCCCCATCATGGCTTTGCTGCTTACTACTCATTTGTGGAGAAAGTATTTGGCGCTGATGCTGTTCTTCACTTTGGCACTCATGGGTCGCTTGAATTCATGCCCGGTAAACAGGTGGGAATGAGTGATGTTTGTTACCCTGACAGTCTTATTGGTAACATTCCCAATGTGTATTACTATGCAGCCAATAACCCATCTGAAGCTACAATAGCCAAACGTCGTAGTTATGCCAACACTATAAGCTATTTGACCCCTCCTGCTGAAAATGCCGGGCTTTACAAGGGGCTTAAACAGCTAAGTGAGCTTATTTCCTCCTACCAATCCCTGAAAGATACTGGTCGAGGGCCCCAGATTGTGAATTCTATTATCAGCACAGCCAGGCAATGTAATCTTGACAAAGATGTGGATCTCCCTGAGGAAGGAGTTGAGATCTCTGCAAAGGAAAGGGATCTTGTGGTTGGGAAAGTCTATTCCAAGATCATGGAGATTGAGTCCCGTCTTTTGCCTTGTGGGCTTCACATCATTGGTGAGCCTCCGTCTGCACTAGAAGCAGTGGCTACTTTGGTTAATATTGCAGCCTTGGACCGCCCTGAGGAGGGAATTTCATCCCTCCCATCGATACTTGCTGCAACAGTTGGTAGGGAGATTGAGGATGTATACAGAGGGAACGACATGGGAATCTTGAAAGATGTCGAGTTGCTCAGGCAAATAATTGAGGCAGCTCGTGGAGCCATTACCTCATTTGTGGAGAGAACAACGAATGACAAGGGTCAAGTTGTGAATGTGAACGACAAATTGACTTCAATCCTTGGGTTTGGATTGAATGAACCATGGGTTCAGTACTTGTCCAACACTAGGTTTGCTAGGGCTGACAGGGAAAAACTCAGGACTCTTTTTGCCTTTTTAGGAGAGTGTTTGAAGCTGGTTGTGGCTGACAATGAGCTCGGGAGTTTGAAACAGGCTCTCGAGGGGAAATATGTGGAGCCAGGTCCTGGTGGTGACCCGATTAGGAACCCGAAAGTGCTTCCTACCGGAAAGAACATTCACGCCCTCGACCCACAGTCCATTCCCACAACTGCAGCCATGCAGAGTGCAAAGGTCGTGGTCGATAGGTTGCTTGAGCGTCAGAAGGCTGACAACGGTGGAAAGTATCCTGAAACAGTTGCACTTGTATTGTGGGGAACTGATAACATCAAGACTTATGGAGAGTCACTTGCTCAGGTTCTGTGGATGATTGGTGTGAGGCCTATTGCTGATACCTTTGGTAGAGTCAACCGAGTGGAACCTGTCAGCCTTGAGGAGCTCGGAAGGCCTAGAATTGATGTTGTTGTCAACTGCTCAGGAGTCTTCAGAGACCTTTTCATTAACCAGATGAATCTTCTTGATCGGGCAATTAAGATGGTTGCCGAACTTGATGAGCCAGAGGAGCAGAACTATGTGAGGAAACATGCCCTTGAACAAGCCAAAACCCTTGGTGTAGATGTAAGGGAGGCTGCTACAAGAATCTTCTCCAATGCTTCAGGCTCTTACTCCTCGAACATCAACCTTGCTGTCGAGAACTCCTCATGGAACGATGAGAAGCAGCTCCAAGACATGTATTTGAGCAGGAAGTCATTTGCCTTCGACAGTGATGCACCTGGTGCAGGCATGGCCGAGAATCGGAAGGTGTTTGAGATGGCTCTAGCCACAGCTGATGCCACGTTCCAAAATCTCGATTCATCAGAGATTTCTCTAACTGATGTGAGCCACTACTTCGATTCAGACCCCACTAATCTGGTGCAGGGACTGAGGAAGGATGGCAAGAAACCAAATGCTTACATTGCTGACACTACCACAGCTAATGCCCAGGTGCGTACACTCTCTGAGACTGTTCGTCTGGATGCAAGAACAAAGCTGTTGAACCCCAAGTGGTACGAAGGGATGCTTTCAACCGGCTATGAGGGTGTTCGTGAGATCGAGAAGAGGCTCACTAACACTGTTGGATGGAGTGCAACTTCAGGTCAGGTGGACAACTGGGTTTACGAAGAGGCGAACACAACCTTCATTCAGGATGAAGAGATGTTGAAGAGGCTGATGAACACCAACCCCAACTCTTTCAGGAAGTTGCTTCAGACATTCTTAGAGGCAAATGGAAGGGGCTACTGGGAAACTTCTGAGGACAACATTGAGAGGTTGAGGCAATTGTATTCTGAAGTTGAAGACAAGATTGAAGGGATTGATAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_292286.p1 GENE.R_Transcript_292286~~R_Transcript_292286.p1 ORF type:complete len:1384 (+),score=369.10,CobN-Mg_chel|PF02514.12|6e+02,CobN-Mg_chel|PF02514.12|0,DUF3479|PF11965.4|1.4e-47 R_Transcript_292286:385-4536(+)
MASVVSSPFTLPTTKTDSISQKQKILHSFLPKKTAQFNSREARKSSVKCVVGGGNGLFTQTSPEVRRIVPEKNQNQNLPTVKIVYVVLEAQYQSSLSAAVQTLNKSSSFAKFEVVGYLVEELRDEKTYQTFCKDLEDANIFIGSLIFVEELAIKVKNAVEKERERMDAVLVFPSMPEVMRLNKLGSFSMSQLGQSKSPFFQLFKRKKQGAGFADSMLKLVRTLPKVLKYLPSDKAQDARLYILSLQFWLGGSPENLINFVKMISGSYVPALKGMKIEYSDPVLFLDSGIWHPLAPCMYDDVKEYLNWYGTRRDASEKLKSKNAPVIGLVLQRSHIVTGDESHYVAVIMELEARGAKVIPIFAGGLDFSGPVEKFFIDPITKKPMVNSVVSLTGFALVGGPARQDHPRAVEALMKLDVPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGMEPIVFSGRDPRTGKSHALHKRVEQLCTRAIKWAELKRKSKVEKKLAITVFSFPPDKGNVGTAAYLNVFASIYSVLKDLKRDGYTVEGLPETAEALIEDVIHDKEAQFNSPNLNVAYKMSVREYQQLTPYATLLEENWGKAPGNLNSDGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKVFGADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKRRSYANTISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVNSIISTARQCNLDKDVDLPEEGVEISAKERDLVVGKVYSKIMEIESRLLPCGLHIIGEPPSALEAVATLVNIAALDRPEEGISSLPSILAATVGREIEDVYRGNDMGILKDVELLRQIIEAARGAITSFVERTTNDKGQVVNVNDKLTSILGFGLNEPWVQYLSNTRFARADREKLRTLFAFLGECLKLVVADNELGSLKQALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQSIPTTAAMQSAKVVVDRLLERQKADNGGKYPETVALVLWGTDNIKTYGESLAQVLWMIGVRPIADTFGRVNRVEPVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAIKMVAELDEPEEQNYVRKHALEQAKTLGVDVREAATRIFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAFDSDAPGAGMAENRKVFEMALATADATFQNLDSSEISLTDVSHYFDSDPTNLVQGLRKDGKKPNAYIADTTTANAQVRTLSETVRLDARTKLLNPKWYEGMLSTGYEGVREIEKRLTNTVGWSATSGQVDNWVYEEANTTFIQDEEMLKRLMNTNPNSFRKLLQTFLEANGRGYWETSEDNIERLRQLYSEVEDKIEGIDR*

Click here to download the sequence:
Link to NCBI Protein BLAST