Transcript Information: R_Transcript_292321.p1


Annotated TAIR IDAT2G27900.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515); Has 316 Blast hits to 252 proteins in 92 species: Archae - 0; Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:11877654-11885238 | Forward length=1124
E-Value7E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3049436213959
Replicate 23.9615661162827
Replicate 36.6991402403842
Condition 2: 8 Hour
Replicate 14.8509732442656
Replicate 25.0628411715892
Replicate 35.1372482887888
Condition 3: 24 Hour
Replicate 14.7648279151839
Replicate 23.5371641616964
Replicate 34.3362433813665


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_292321.p1 GENE.R_Transcript_292321~~R_Transcript_292321.p1 ORF type:internal len:106 (+),score=21.04 R_Transcript_292321:2-316(+)
TCTTTCACCAACAGCAACATTCAAACAAAAAACTTCAACCCCAATGAAATTCACAATGATGATGATGATGATGATGATGGCACACTCTCTCTGGTAGATGATATAGATGAAATGCAGCCGGGAACACCATCGCCATTTGGACGATACCTTTTGAGTCCACTCCCTTTCCTTTGCAGCGTCAATGGCGAACTGAATAGTACTAGCGAGGGTTTAGACAGCTCTAGGGTTTTGTTTTTGGCTTCTTTGTGGTTGTTTCAAGGTGGTGGTTCTATGGATTTGTCGAAGGTCGGTGAAAAGATTCTTAGCTCCGTTCGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_292321.p1 GENE.R_Transcript_292321~~R_Transcript_292321.p1 ORF type:internal len:106 (+),score=21.04 R_Transcript_292321:2-316(+)
SFTNSNIQTKNFNPNEIHNDDDDDDDGTLSLVDDIDEMQPGTPSPFGRYLLSPLPFLCSVNGELNSTSEGLDSSRVLFLASLWLFQGGGSMDLSKVGEKILSSVR

Click here to download the sequence:
Link to NCBI Protein BLAST