Transcript Information: R_Transcript_29236.p1


Annotated TAIR IDAT1G11650.2
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)ATRBP45B, RBP45B
Annotation TypeHomolog
Chromosome Positionchr1:3914895-3917941 | Forward length=405
E-Value4E-109
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 175.229925150081
Replicate 263.892539494659
Replicate 371.387832862946
Condition 2: 8 Hour
Replicate 197.571522599909
Replicate 2117.46539195053
Replicate 3130.04824824227
Condition 3: 24 Hour
Replicate 186.71657818667
Replicate 280.515653975221
Replicate 387.550818747589


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_29236.p1 GENE.R_Transcript_29236~~R_Transcript_29236.p1 ORF type:3prime_partial len:395 (+),score=81.87,RRM_1|PF00076.18|2.9e-13,RRM_1|PF00076.18|7.3e-14,RRM_1|PF00076.18|5.2e-18,RRM_6|PF14259.2|6.3e-06,RRM_6|PF14259.2|2.5e-05,RRM_6|PF14259.2|6.4e-12,RRM_5|PF13893.2|1.8e-05,RRM_5|PF13893.2|0.06,RRM_5|PF13893.2|2.3e-08,RRM_7|PF16367.1|7.8e+03,RRM_7|PF16367.1|1.7e+02,RRM_7|PF16367.1|2.1,RRM_7|PF16367.1|0.023,RRM_occluded|PF16842.1|1.2e+02,RRM_occluded|PF16842.1|0.0002 R_Transcript_29236:284-1465(+)
ATGATGCAACCAGGACCAGCCATGGCAGCTCCACAACCTCCAATAGATCAACAACAACATTATCAACAACATCAGATGTGGCCTCAGCAACCACAACAACAACCTCATCCTCAGATGTGGCCTCAGCAACCACAACAACAACCTCATCCTCAGATGTGGCCTCAACAACAACAGCAGCAGTACCAGCAACAACAAAAGCAACAGCAACCACCGGCTAACGCTGATGAGGTCCGTACACTTTGGATTGGAGATCTCCAGTACTGGATGGACGAGAATTATATTCGTAATTGCTTCGCTCAAACTGGAGAGGTTGTTAATATTAAAATCATACGTAATAAGCAAACCCAACAGTCTGAGTGCTATGGTTTCATTGAGTTTACATCTCATGCTGCTGCCGAGAGAATTTTACAGACATACAACAACACCTTGATGCCAAGTGTTGAGCAAAACTACAGATTGAACTGGGCGTTCTACGGGTCTGGTGACAAACGTGGAGATGATACTTCTGACCACACAATATTTGTTGGGGACTTGGCTGCAGACGTTACTGATTACATATTGCAAGAGACTTTTAGAGCTCACTATCAATCTGTAAAGGGTGCTAAGGTTGTTATTGATAGGCTTACCGGTAGGTCAAAGGGGTATGGATTTGTTCGTTTTGGAGATGAAAGTGAACAATTACGTGCTATGTCAGAAATGAATGGAGTCATGTGCTCAGGCCGAGCAATGCGTGTTGGAGCAGCTGCAAATAAAAAGAATGGGGGTGGAACAGCCTCTTACCAGAGTACTCCGGGAACTCAAAATGACAGTGATCCAAATAACACTACTATTTTTGTAGGCAATTTGGATTCCAATGTGACTGATGAACATTTGAGGCAAACTTTTAGTGCTTATGGGGCATTGTTACATGTGAAAATACCAATGGGCAAGCAATGCGGATTTGTTCAATTTGCTAACAGAGCTTCTGCTGAGGAAGCATTAAGGGCGTTGAATGGTGTACAATTGGGTGGTCGAAATGTTAGACTTTCTTGGGGCCGTAGTCCTTCAAACAAACAGCCCCAAGCTGATCAGAGCCAATGGAATGCAAATGCTGCTTATTATGGGTATCAGCAGGGATATGAGTCCTATGGATATGCTCCTCAAGACCCGAGCATGTACTATGGTGGTTATCCTGGATATGGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_29236.p1 GENE.R_Transcript_29236~~R_Transcript_29236.p1 ORF type:3prime_partial len:395 (+),score=81.87,RRM_1|PF00076.18|2.9e-13,RRM_1|PF00076.18|7.3e-14,RRM_1|PF00076.18|5.2e-18,RRM_6|PF14259.2|6.3e-06,RRM_6|PF14259.2|2.5e-05,RRM_6|PF14259.2|6.4e-12,RRM_5|PF13893.2|1.8e-05,RRM_5|PF13893.2|0.06,RRM_5|PF13893.2|2.3e-08,RRM_7|PF16367.1|7.8e+03,RRM_7|PF16367.1|1.7e+02,RRM_7|PF16367.1|2.1,RRM_7|PF16367.1|0.023,RRM_occluded|PF16842.1|1.2e+02,RRM_occluded|PF16842.1|0.0002 R_Transcript_29236:284-1465(+)
MMQPGPAMAAPQPPIDQQQHYQQHQMWPQQPQQQPHPQMWPQQPQQQPHPQMWPQQQQQQYQQQQKQQQPPANADEVRTLWIGDLQYWMDENYIRNCFAQTGEVVNIKIIRNKQTQQSECYGFIEFTSHAAAERILQTYNNTLMPSVEQNYRLNWAFYGSGDKRGDDTSDHTIFVGDLAADVTDYILQETFRAHYQSVKGAKVVIDRLTGRSKGYGFVRFGDESEQLRAMSEMNGVMCSGRAMRVGAAANKKNGGGTASYQSTPGTQNDSDPNNTTIFVGNLDSNVTDEHLRQTFSAYGALLHVKIPMGKQCGFVQFANRASAEEALRALNGVQLGGRNVRLSWGRSPSNKQPQADQSQWNANAAYYGYQQGYESYGYAPQDPSMYYGGYPGYG

Click here to download the sequence:
Link to NCBI Protein BLAST