Transcript Information: R_Transcript_292398.p1


Annotated TAIR IDAT5G23400.1
Annotated Gene NameLeucine-rich repeat (LRR) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:7880603-7882372 | Forward length=589
E-Value8E-111
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3148245701411
Replicate 21.3095405665051
Replicate 31.9525493585078
Condition 2: 8 Hour
Replicate 11.4762787598131
Replicate 20.69732479754217
Replicate 31.0943798502936
Condition 3: 24 Hour
Replicate 12.5296544346535
Replicate 21.1921761562474
Replicate 34.3684400206697


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_292398.p1 GENE.R_Transcript_292398~~R_Transcript_292398.p1 ORF type:internal len:481 (-),score=75.07,LRR_8|PF13855.2|2.1e-05,LRR_8|PF13855.2|8e-09,LRR_8|PF13855.2|1.3e-09,LRR_8|PF13855.2|3.9e-06,LRR_8|PF13855.2|5e-10,LRR_8|PF13855.2|0.23,LRR_8|PF13855.2|8.6e-06,LRR_8|PF13855.2|5.1e-05,LRR_4|PF12799.3|4e+02,LRR_4|PF12799.3|37,LRR_4|PF12799.3|0.0035,LRR_4|PF12799.3|4.2,LRR_4|PF12799.3|0.011,LRR_4|PF12799.3|0.0014,LRR_4|PF12799.3|0.00018,LRR_4|PF12799.3|0.23,LRR_4|PF12799.3|6.5,LRR_4|PF12799.3|0.16,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|1.8e+02,LRR_1|PF00560.29|28,LRR_1|PF00560.29|18,LRR_1|PF00560.29|17,LRR_1|PF00560.29|0.067,LRR_1|PF00560.29|65,LRR_1|PF00560.29|2,LRR_1|PF00560.29|69,LRR_1|PF00560.29|5.3e+02,LRR_1|PF00560.29|0.027,LRR_1|PF00560.29|2e+02,LRRNT_2|PF08263.8|2.8e-10 R_Transcript_292398:2-1441(-)
CCAGCCCATTCTGCTTGCTTTACAGCCTTTCCCCCTCTTTTCCCTTTCCCTGTTGTTCCCATTTTACTAATCATTTTCCCCATATTTTTTTTTTTCAAACTTTCAAATTTAGATCAGAACCCACATTCCAAAATGCAGAGATTGAGATGGGTTTTGAAGTTGTTGGTGATTCTTGCAGTTTTTTGTCAGTTCTCAGCATCTGTTTCTGATGTTGCTAGTTCACCAGCTGATAGAGCTGCACTTCTGAGCTTCAAAGCCAAGATCATCAGGGATACAACAGGTACACTTTCCTCTTGGGTTGGTACTGATTGTTGTGGAGGTGATTGGGAAGGTGTACAGTGCAACTTAGCCACTGGGAGAGTCACTTCTCTTGTGCTTCAGAAACTTTCCTCGGACGATGGAGACGCTGCGCCTGATGACCTGTACATGGAGGGCACTCTCTCCCCTGCTTTGAGCAACTTGCAGTTCCTCGAAACTCTGGTCATCAGTGGGATGAAGCACATCAGGGGCGCCATTCCCGAGAGCCTCTCGAGGTTGGCACACCTTTCACAGCTTGTCCTTGAGGGTAACTCTTTAATGGGAGCTATACCTTCGAGTCTTGGTCGTCTGCCTTTACTCAAGACCCTCATATTGGATGGCAATCGATTGAAGGGTCCAGTTCCGCCTTCCTTGGGAAACCTCAAGGGACTGCAACAGCTTAATTTAGGCAAAAACTACTTGGTTGGTTCTATCCCAGCTACCTTCAGAAATCTTCAGAGCTTGCAGTTGCTTGATCTTAGCTCTAATTTAGTGTCTGGCTTGATCCCTGATTTCGTTGGACAGTTTCACAACCTCACTTTCCTTGATCTTTCTAATAACCAGCTCACTGGTCCCATACCTGTCTCACTTTGTAGCCTTGCCGCGCTCTCTGATATTTCCCTGAGCAACAACCAGCTCACAGGAAGGATTCCTGAGCAAATTAGTGGCCTTAAAGCCCTCACCAGCCTTTCGCTTAGCAATAACCGTTTTACAGGTCAAATTCCTGAATCACTTGCTACATTACACAGCTTATGGTACCTCAATTTGTCTCAAAATGCACTCTCGAATCCCTTGCCAAATACCCTTGTCAAAGGTTTGCCTTCTCTTTTGTCAATTGACTTGTCCTACAACAAATTCAGCTTGGAGACGGTTCCTGATTGGATCAGGAGTCGCGAGCTCTCAGCTGTCCATTTAGCCAGTTGCAACCTCAGAGGAATACTTCCAGACTTCACGAGGCCTGCCTCCTTGACCTCCTTGGACCTGTCTAATAACCATTTCATAGGCGGTATCTCGAATTTCTTCACAAGGATGTCCAACCTGCAGTTTCTGAAGCTGTCCAACAACCAACTCAAGTACGACATTTCAAAGATAGCATTGCCAAAAGGGATCTCTTCTATCGACCTCAGCTCAAATCAGCTCTTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_292398.p1 GENE.R_Transcript_292398~~R_Transcript_292398.p1 ORF type:internal len:481 (-),score=75.07,LRR_8|PF13855.2|2.1e-05,LRR_8|PF13855.2|8e-09,LRR_8|PF13855.2|1.3e-09,LRR_8|PF13855.2|3.9e-06,LRR_8|PF13855.2|5e-10,LRR_8|PF13855.2|0.23,LRR_8|PF13855.2|8.6e-06,LRR_8|PF13855.2|5.1e-05,LRR_4|PF12799.3|4e+02,LRR_4|PF12799.3|37,LRR_4|PF12799.3|0.0035,LRR_4|PF12799.3|4.2,LRR_4|PF12799.3|0.011,LRR_4|PF12799.3|0.0014,LRR_4|PF12799.3|0.00018,LRR_4|PF12799.3|0.23,LRR_4|PF12799.3|6.5,LRR_4|PF12799.3|0.16,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|1.8e+02,LRR_1|PF00560.29|28,LRR_1|PF00560.29|18,LRR_1|PF00560.29|17,LRR_1|PF00560.29|0.067,LRR_1|PF00560.29|65,LRR_1|PF00560.29|2,LRR_1|PF00560.29|69,LRR_1|PF00560.29|5.3e+02,LRR_1|PF00560.29|0.027,LRR_1|PF00560.29|2e+02,LRRNT_2|PF08263.8|2.8e-10 R_Transcript_292398:2-1441(-)
PAHSACFTAFPPLFPFPVVPILLIIFPIFFFFKLSNLDQNPHSKMQRLRWVLKLLVILAVFCQFSASVSDVASSPADRAALLSFKAKIIRDTTGTLSSWVGTDCCGGDWEGVQCNLATGRVTSLVLQKLSSDDGDAAPDDLYMEGTLSPALSNLQFLETLVISGMKHIRGAIPESLSRLAHLSQLVLEGNSLMGAIPSSLGRLPLLKTLILDGNRLKGPVPPSLGNLKGLQQLNLGKNYLVGSIPATFRNLQSLQLLDLSSNLVSGLIPDFVGQFHNLTFLDLSNNQLTGPIPVSLCSLAALSDISLSNNQLTGRIPEQISGLKALTSLSLSNNRFTGQIPESLATLHSLWYLNLSQNALSNPLPNTLVKGLPSLLSIDLSYNKFSLETVPDWIRSRELSAVHLASCNLRGILPDFTRPASLTSLDLSNNHFIGGISNFFTRMSNLQFLKLSNNQLKYDISKIALPKGISSIDLSSNQLF

Click here to download the sequence:
Link to NCBI Protein BLAST