Transcript Information: R_Transcript_29244.p1


Annotated TAIR IDAT3G46510.1
Annotated Gene Nameplant U-box 13
Annotated Gene Symbol(s)PUB13, ATPUB13
Annotation TypeOrtholog
Chromosome Positionchr3:17124106-17126539 | Reverse length=660
E-Value2.6E-284
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.018940698787
Replicate 210.717165859223
Replicate 314.973806217235
Condition 2: 8 Hour
Replicate 110.931797841538
Replicate 214.772488003565
Replicate 322.847298486022
Condition 3: 24 Hour
Replicate 117.401954018218
Replicate 214.815980589915
Replicate 318.386889611802


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_29244.p1 GENE.R_Transcript_29244~~R_Transcript_29244.p1 ORF type:complete len:719 (+),score=160.23,Arm|PF00514.19|1e-10,Arm|PF00514.19|0.024,Arm|PF00514.19|8.6e-07,Arm|PF00514.19|0.074,Arm|PF00514.19|0.0015,Arm|PF00514.19|6.4e+03,U-box|PF04564.11|1.4e-20,U-box|PF04564.11|1.2e+04,HEAT_2|PF13646.2|0.0049,HEAT_2|PF13646.2|19,HEAT_2|PF13646.2|22,Neurochondrin|PF05536.7|67,Neurochondrin|PF05536.7|0.00013 R_Transcript_29244:159-2159(+)
ATGGTATTGGAGGATGAGAAAGGAGGACAGCAAGAGCAAAGGGAGTTACTGAAGATAATAACCGATACAATCGAAGAAATCAATTCAATAACAGACTACCGTCCTTGTATCAAGAAACAGTTCTGTAATCTTGCAAGAAGGCTCAAGCTTCTTCTCCCAATGTTCGACGAAATCAAGGAAGCTAATCAACCTCCGTCTCTGGACTCTCTTCAATCCTTTCACCTTTTGTCTCATTCCCTTCAACCCGCTTTGTTTCTCCTCCGATTTGGCTCTCGTGCCAGCAAGATTTTTCTGGCCCTTGAAAGAGAAGAGACAATGACTAGGCTGCATGAAGTGACATCTGAATTGGAGAAAGCTCTGGATGAAATTCCCTATGAGAAGCTTGAAATTTCTGATGAAGTCAGGGAACAGGTTGAGCTCGTTCTTTCTCAGTTTAAAAGAGCCAAGGGAAGGGTTGATCCATCTGATGAAGAACTTGACAAGGATCTTTCATCTCTATACAATAACAGCATGGATGCAGATATGGATCTGGCTTTAGTGAAGCGAGTGGCTGAAAAGTTACAATTGATCAAGATCGAGGATCTGATGCAAGAGTCTGTCTCTCTTTCTGAGATGGTTGCTGCAACTGGTGGAGATCCTAACGAGAAAATACAGAGGATGTCCAATCTGCTTAACAAAATTCAATATGTTGTCCAGACTGAAAAACCCCACGTGGATACTGCAATGGAGATGAATAATATTACTGTGAAGTTTATGGGAGTGACACCTACTGAAGGTAGTCAGACATCTCTTGTCATACCAGATGACTTTCGCTGTCCAATTTCACTTGAGCTGATGAGGGATCCAGTTATTATTTCAACTGGACAGACCTATGAACGTTCATGTATTGAGAAATGGATTGCAGCAGGTCACAAAACTTGCCCAAAGACACAGCAGACACTCCAGAGCCTTGTTCTTACTCCCAACTACACCTTGCGATGCCTTATAATACAATGGTGTGAAAAGAATGGGGTACAAATGCCCCCAAGGCCAGGCAATTCTCAAGAGGGAAAACCTACCTCTTCTTGCTCACCTGCAGAACGTTCAAAGATCCAGGAGCTCCTTTGCAAGCTAACCTCCTGCAACCCCGAGGACCAGCGGATTGCAGCTGGTGAAATCAGGCTCCTTGCAAAGCGAAATGCTGATAACCGAGTGGCAATTGCTGAAGCTGGGGCTATCCCACCTCTCGTTGACCTCCTCTTTAAACCAGATTCACGCACCCAGGAGCATGCTGTGACCGCTCTCCTTAACCTCTCAATATGCGATGATAACAAAGGTAGCATCATGAACTCTGGGGCAGTGCCTGGCATAGTCCACGTGCTGAAAAAGGGTGGCATGGAGGCTAGAGAAAATGCAGCTGCTACGCTCTTTAGTCTCTCAGTTGTGGATGAAAACAAGGTCACAATTGGTGCTCTGGGTGCAATTCCTCCACTTGTTATGTTACTGAGTGAGGGCACCCAAAGAGGGAAAAAAGATGCTGCGACTGCACTTTTCAACTTGTGCATTTACCAAGGAAATAAAGGCAAGGCAGTCAGGGCTGGGATTGTTCCTATATTGATGACATTATTGACAGAGCCTGGAGGTAGCATGCTGGATGAGGCACTAGCGATTCTTGCGGTACTTGCTAGCCACCCTGAAGGTAAAGCTGCCATAGGCTCTGCAGATGCCTTGCCTGTTTTGGCGGATGTGATTGGGAATGGATCACCCCGGAATAAGGAGAATGCAACTGCAGTATTGGTGCACCTTTGTGCAGGAGACCATAACTATCTAGTGGCAGCTCAGGAGCTTGGAGTTATGGGCCCACTCCTTGAGATGACCCAAAATGGCACTGATAGAGGTAAGCGGAAGGCCCAGCAATTACTTGAACGAATGGATCGATATGTTGAGCAGCAGAAGCAGGCCCAGGCACAAGCCGGGACTCAGGGACAGAATCACGCCCCTACTGCTGCTGAAGGGGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_29244.p1 GENE.R_Transcript_29244~~R_Transcript_29244.p1 ORF type:complete len:719 (+),score=160.23,Arm|PF00514.19|1e-10,Arm|PF00514.19|0.024,Arm|PF00514.19|8.6e-07,Arm|PF00514.19|0.074,Arm|PF00514.19|0.0015,Arm|PF00514.19|6.4e+03,U-box|PF04564.11|1.4e-20,U-box|PF04564.11|1.2e+04,HEAT_2|PF13646.2|0.0049,HEAT_2|PF13646.2|19,HEAT_2|PF13646.2|22,Neurochondrin|PF05536.7|67,Neurochondrin|PF05536.7|0.00013 R_Transcript_29244:159-2159(+)
MVLEDEKGGQQEQRELLKIITDTIEEINSITDYRPCIKKQFCNLARRLKLLLPMFDEIKEANQPPSLDSLQSFHLLSHSLQPALFLLRFGSRASKIFLALEREETMTRLHEVTSELEKALDEIPYEKLEISDEVREQVELVLSQFKRAKGRVDPSDEELDKDLSSLYNNSMDADMDLALVKRVAEKLQLIKIEDLMQESVSLSEMVAATGGDPNEKIQRMSNLLNKIQYVVQTEKPHVDTAMEMNNITVKFMGVTPTEGSQTSLVIPDDFRCPISLELMRDPVIISTGQTYERSCIEKWIAAGHKTCPKTQQTLQSLVLTPNYTLRCLIIQWCEKNGVQMPPRPGNSQEGKPTSSCSPAERSKIQELLCKLTSCNPEDQRIAAGEIRLLAKRNADNRVAIAEAGAIPPLVDLLFKPDSRTQEHAVTALLNLSICDDNKGSIMNSGAVPGIVHVLKKGGMEARENAAATLFSLSVVDENKVTIGALGAIPPLVMLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGIVPILMTLLTEPGGSMLDEALAILAVLASHPEGKAAIGSADALPVLADVIGNGSPRNKENATAVLVHLCAGDHNYLVAAQELGVMGPLLEMTQNGTDRGKRKAQQLLERMDRYVEQQKQAQAQAGTQGQNHAPTAAEGG*

Click here to download the sequence:
Link to NCBI Protein BLAST